SubtiBank SubtiBank

Categories containing this gene/protein


transcription factors and their control, Skin element, essential genes

This gene is a member of the following regulons


The SknR regulon


Gene


  • Coordinates on the chromosome (coding sequence): 2,698,893 -> 2,699,243
  • Phenotypes of a mutant

  • essential in the wild type background (due to overexpression of the toxic proteins YqaH and YqaM) PubMed
  • no phenotype if deleted with the complete skin element PubMed
  • The protein


    Catalyzed reaction/ biological activity

  • binds the yqaF promoter region to repress transcription of the yqaF-yqdA-yqaG-yqaH-yqaI-yqaJ-yqaK-yqaL-yqaM-yqzO-yqaN operon PubMed
  • Protein family

  • Xre family
  • Paralogous protein(s)

  • YonR, Xre
  • Kinetic information

    Domains

    Modification

    Cofactors

    Effectors of protein activity

    Structure

    Localization

    Interactions

    Additional information

    Expression and Regulation


    Operon

    Sigma factor

    Regulation

    Regulatory mechanism

    Additional information

    Biological materials


    Mutant

    Expression vector

    lacZ fusion

    GFP fusion

    two-hybrid system

    FLAG-tag construct

    Antibody

    Labs working on this gene/protein


    References


    Kimura T(1), Amaya Y, Kobayashi K, Ogasawara N, Sato T.

    Repression of sigK intervening (skin) element gene expression by the CI-like protein SknR and effect of SknR depletion on growth of Bacillus subtilis cells.

    J Bacteriol. 2010 Dec;192(23):6209-16. doi: 10.1128/JB.00625-10. Epub 2010 Oct 1.
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