SubtiBank SubtiBank

It will happen very soon:

International Conference on Bacilli and Gram-positive bacteria

June 11 - 15, 2017, Berlin, Germany

Check out the program here

'

Categories containing this gene/protein


utilization of specific carbon sources, transcription factors and their control

This gene is a member of the following regulons


YcbG regulon

The YcbG regulon


Gene


  • Coordinates on the chromosome (coding sequence): 273,237 -> 273,938
  • The protein


    Catalyzed reaction/ biological activity

    Protein family

  • GntR family of transcription factors
  • Paralogous protein(s)

    Kinetic information

    Domains

    Modification

    Cofactors

    Effectors of protein activity

    Structure

    Localization

    Interactions

    Additional information

    Expression and Regulation


    Operon

  • ycbC-ycbD-ycbE-ycbF-ycbG-ycbH-ycbJ PubMed
  • Sigma factor

    Regulation

  • induced by D-glucarate/galactarate (YcbG) PubMed
  • Regulatory mechanism

  • YcbG: transcription repression PubMed
  • Additional information

    Biological materials


    Mutant

  • MGNA-C030 (ycbG::erm), available at the NBRP B. subtilis, Japan
  • Expression vector

    lacZ fusion

    GFP fusion

    two-hybrid system

    FLAG-tag construct

    Antibody

    Labs working on this gene/protein


    References


    Leyn SA, Kazanov MD, Sernova NV, Ermakova EO, Novichkov PS, Rodionov DA

    Genomic reconstruction of the transcriptional regulatory network in Bacillus subtilis

    J Bacteriol. 2013 Jun;195(11):2463-73. doi: 10.1128/JB.00140-13. Epub 2013 Mar 15. PubMed PMID: 23504016; PubMed Central PMCID: PMC3676070.
    Hosoya S, Yamane K, Takeuchi M, Sato T

    Identification and characterization of the Bacillus subtilis D-glucarate/galactarate utilization operon ycbCDEFGHJ

    FEMS Microbiol Lett. 2002 May 7;210(2):193-9. PubMed PMID: 12044674.
    '
    No login