SubtiBank SubtiBank

Categories containing this gene/protein


transporters/ other

This gene is a member of the following regulons


Gene


  • Coordinates on the chromosome (coding sequence): 2,779,462 -> 2,780,262
  • The protein


    Catalyzed reaction/ biological activity

    Protein family

    Paralogous protein(s)

  • YwcJ
  • Kinetic information

    Domains

    Modification

    Cofactors

    Effectors of protein activity

    Structure

    Localization

    Interactions

    Additional information

    Expression and Regulation


    Operon

  • yrhG PubMed
  • Sigma factor

    Regulation

    Regulatory mechanism

    Additional information

  • A ncRNA is predicted between yrzI and yrhG PubMed
  • the mRNA is substantially stabilized upon depletion of RNase Y PubMed
  • Biological materials


    Mutant

    Expression vector

    lacZ fusion

    GFP fusion

    two-hybrid system

    FLAG-tag construct

    Antibody

    Labs working on this gene/protein


    References


    Lehnik-Habrink M, Schaffer M, Mäder U, Diethmaier C, Herzberg C, Stülke J

    RNA processing in Bacillus subtilis: identification of targets of the essential RNase Y

    Mol Microbiol. 2011 Sep;81(6):1459-73. doi: 10.1111/j.1365-2958.2011.07777.x. Epub 2011 Aug 4. PubMed PMID: 21815947.
    Irnov I, Sharma CM, Vogel J, Winkler WC

    Identification of regulatory RNAs in Bacillus subtilis

    Nucleic Acids Res. 2010 Oct;38(19):6637-51. doi: 10.1093/nar/gkq454. Epub 2010 Jun 4. PubMed PMID: 20525796; PubMed Central PMCID: PMC2965217.
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