ywcJ

ywcJ
168

similar to nitrate channel

locus
BSU_38060
Molecular weight
28.31 kDa
pI
7.68
Protein length
Gene length
function
unknown
product
unknown
essential
no
synonyms
ywcJ, ipa-48r

Genomic Context

Categories containing this gene/protein

List of homologs in different organisms, belongs to COG2116 (Galperin et al., 2021)

This gene is a member of the following regulons

Gene
Coordinates
3,905,333  3,906,103
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The protein
Protein family
FNT transporter (TC 2.A.44) family (with [protein|FA18A10769974D392247FB32A0891AE74DF248A0|yrhG], according to UniProt)
Structure
[PDB|3TDP] (from Clostridium difficile, 36% identity) [pubmed|20010838]
[AF|P39608]
Paralogous protein(s)
[protein|FA18A10769974D392247FB32A0891AE74DF248A0|yrhG]
[wiki|Localization]
cell membrane (according to UniProt)
Expression and Regulation
Operons
genes
[gene|5FB51BA52819AEB4E6408A096B107ACB533C611A|ywcJ]
description
[pubmed|22383849]
regulatory mechanism
[protein|B5EF521437323EF43F08E5EFDB5C798616CA499A|rex]: repression, [Pubmed|16207915], in [regulon|protein:B5EF521437323EF43F08E5EFDB5C798616CA499A|rex regulon]
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[gene|5FB51BA52819AEB4E6408A096B107ACB533C611A|ywcJ]

2024-03-13 23:00:38

Bzhu

40

e075350ea3c934aff147e03646ea207aa3c3a20b

70085DADA3A399218773CE67AC9108DE3AC140AF

Biological materials
Mutant
MGNA-B672 (ywcJ::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1671 NBRP B. subtilis, Japan]
BKE38060 ([gene|5FB51BA52819AEB4E6408A096B107ACB533C611A|ywcJ]::erm  trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKE38060 BGSC],  [Pubmed|28189581], upstream reverse: _UP1_CATTGTCTTTTCCTGCTTTC,  downstream forward: _UP4_TAAAAAAACTTCCAGAGATC
BKK38060 ([gene|5FB51BA52819AEB4E6408A096B107ACB533C611A|ywcJ]::kan  trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKK38060 BGSC],  [Pubmed|28189581], upstream reverse: _UP1_CATTGTCTTTTCCTGCTTTC,  downstream forward: _UP4_TAAAAAAACTTCCAGAGATC
References
16207915,16207915,20010838

5FB51BA52819AEB4E6408A096B107ACB533C611A

Page visits: 1833

Time of last update: 2024-03-25 05:43:07

Author of last update: Melvin.boenninger