pepF
168
oligoendopeptidase, inhibits sporulation upon overexpression
locus
BSU_11540
Molecular weight
69.97 kDa
pI
5.13
function
protein degradation
product
oligoendopeptidase
essential
no
synonyms
pepF, yjbG
Outlinks
Genomic Context
Categories containing this gene/protein
List of homologs in different organisms, belongs to COG1164 (Galperin et al., 2021)
This gene is a member of the following regulons
Gene
Coordinates
1,231,083 1,233,095
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The protein
Protein family
peptidase M3B family (single member, according to UniProt)
Structure
[PDB|2QR4] (from Enterococcus faecium, 52% identity)
[AF|O31605]
Paralogous protein(s)
[protein|91C89960ABE800BB25CA48A97A5D32CC308D3D31|yusY/1]
Expression and Regulation
Operons
genes
[gene|3F0700B5E3B944116D2F9A150F7AB4263A3E41EE|pepF]
description
[Pubmed|22383849]
genes
[gene|0B1F5A160ADFF3EA904122A7E43E13C5828B31BE|coiA]-[gene|3F0700B5E3B944116D2F9A150F7AB4263A3E41EE|pepF]
description
[Pubmed|22383849]
Biological materials
Mutant
MGNA-B154 (yjbG::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1153 NBRP B. subtilis, Japan]
1A823 ( ''pepF''::''erm''), [Pubmed|12682299], available at [http://pasture.asc.ohio-state.edu/BGSC/getdetail.cfm?bgscid=1A823&Search=1A823 BGSC]
BKE11540 ([gene|3F0700B5E3B944116D2F9A150F7AB4263A3E41EE|pepF]::erm trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKE11540 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CACAGCCTGCCCACCACCTT, downstream forward: _UP4_TAAAAAAGTAAGCCTGTGCG
BKK11540 ([gene|3F0700B5E3B944116D2F9A150F7AB4263A3E41EE|pepF]::kan trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKK11540 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CACAGCCTGCCCACCACCTT, downstream forward: _UP4_TAAAAAAGTAAGCCTGTGCG
References
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Time of last update: 2024-04-16 17:00:36
Author of last update: Melvin.boenninger