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ywjH [Tue Dec 13 2016 11:16:37 GMT+0100 (CET)]
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ywjH [Tue Dec 13 2016 11:16:37 GMT+0100 (CET)]

transaldolase
locus
BSU37110
pI
5.00
mw
22.00 kDa
function
pentose phosphate pathway
product
transaldolase
essential
no
ec
2.2.1.2
synonyms

Genomic Context

      

categories

  • [category|SW 2|Metabolism] → [category|SW 2.2|Carbon metabolism] → [category|SW 2.2.1|Carbon core metabolism] → [category|SW 2.2.1.3|Pentose phosphate pathway]
  • [category|SW 6|Groups of genes] → [category|SW 6.4|Phosphoproteins] → [category|SW 6.4.5|Phosphorylation on a Ser residue]
  • [SW|Categories] containing this gene/protein

  • [SW|carbon core metabolism], [SW|phosphoproteins], [SW|most abundant proteins]
  • Gene

    Coordinates on the chromosome (coding sequence)
    3,807,754 -> 3,808,392

    The protein

    Catalyzed reaction/ biological activity

  • Sedoheptulose 7-phosphate D-glyceraldehyde 3-phosphate = D-erythrose 4-phosphate D-fructose 6-phosphate (according to Swiss-Prot)
  • Protein family

  • Type 3B subfamily (according to Swiss-Prot)
  • Modification

  • phosphorylation on Ser-39 [Pubmed|17218307,16493705,17726680], ''in vitro'' phosphorylated by [protein|search|PrkC] [Pubmed|20389117]
  • Structure

  • [PDB|3R8R] [Pubmed|22212631]
  • [SW|Localization]

  • cytoplasm (according to Swiss-Prot)
  • [SW|Interactions]

  • forms decamers (dimer of pentamers) [Pubmed|22212631]
  • Expression and Regulation

    Operon

  • ''[protein|search|fbaA]-[protein|search|ywjH]'' [Pubmed|11489127]
  • Additional information

  • belongs to the 100 [SW|most abundant proteins] [PubMed|15378759]
  • Biological materials

    Expression vector

  • for expression, purification in ''E. coli'' with N-terminal Strep-tag, in [SW|pGP172]: pGP819, available in [SW|Stülke] lab
  • pGP1790 (expression of ''[protein|search|ywjH]'' in ''B. subtilis'', in [SW|pGP1389]), available in [SW|Stülke] lab
  • GP1409 (''ywjH''-''Strep'' ''(spc)'') & GP1411 (''ywjH''-''Strep'' ''(cat)''), purification from ''B. subtilis'', for [SW|SPINE], available in [SW|Stülke] lab
  • two-hybrid system

  • ''B. pertussis'' adenylate cyclase-based bacterial two hybrid system ([SW|BACTH]), available in [SW|Stülke] lab
  • FLAG-tag construct

  • GP1407 (spc, based on [SW|pGP1331]), available in the [SW|Stülke] lab
  • Antibody

  • **
  • References

  • 17726680,17218307,16493705,11489127,20389117,21857661,22212631,15378759