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ybaR
function
uptake of fumarate
product
fumarate:proton symporter
Genomic Context
categories
[category|SW 1|Cellular processes] → [category|SW 1.2|Transporters] → [category|SW 1.2.4|Transporters/ other] → [category|SW 1.2.4.4|Transporter for organic acids][category|SW 2|Metabolism] → [category|SW 2.2|Carbon metabolism] → [category|SW 2.2.2|Utilization of specific carbon sources] → [category|SW 2.2.2.1|Utilization of organic acids][category|SW 6|Groups of genes] → [category|SW 6.2|Membrane proteins]Gene
Coordinates
177,083 178,519
The protein
Protein family
SLC26A/SulP transporter (TC 2.A.53) family (with [protein|7028580E25DD6C1D49A14F29DDCC02012F94FED7|YvdB], according to UniProt)[SW|Domains]
[SW|STAS domain] (aa 389-478) (according to UniProt)Structure
[PDB|5DA0] (from ''Deinococcus radiodurans'', 63% identity) [Pubmed|26367249][SW|Localization]
cell membrane (according to UniProt)Expression and Regulation
Operons
genes
[gene|58B61B18D1C69BB9DCAB5EDFBFB3A498AA121386|ybaR]
description
[Pubmed|22383849]
view in new tabBiological materials
Mutant
MGNA-B948 (ybaR::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1947 NBRP B. subtilis, Japan]BKE01580 ([gene|58B61B18D1C69BB9DCAB5EDFBFB3A498AA121386|ybaR]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE01580 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CAAATATAACGACTCCTTTT, downstream forward: _UP4_TAAAATAGAGAAGCCCAGATBKK01580 ([gene|58B61B18D1C69BB9DCAB5EDFBFB3A498AA121386|ybaR]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK01580 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CAAATATAACGACTCCTTTT, downstream forward: _UP4_TAAAATAGAGAAGCCCAGATReferences