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ybcF

similar to carbonic anhydrase

locus: BSU_01860

pI: 4.91

mw: 19.36 kDa

protein length: 175 aa

gene length: 528 bp

function: unknown

product: unknown

essential: no

synonyms

Genomic Context

categories

• [category|SW 5|Prophages and mobile genetic elements] → [category|SW 5.1|Prophages] → [category|SW 5.1.4|Prophage 1]
• [category|SW 6|Groups of genes] → [category|SW 6.6|Poorly characterized/ putative enzymes]

Gene

Coordinates: 209,633 210,160

The protein

Protein family

• beta-class carbonic anhydrase family (with [protein|E00889289B07BE78CC0C8E0962A55C3B14871E00|YvdA] and [protein|F942C0F4618FACEF35ACA629355BAC288556E7B6|YtiB], according to UniProt)

Paralogous protein(s)

• [protein|E00889289B07BE78CC0C8E0962A55C3B14871E00|YvdA]: (29.4%)
• [protein|F942C0F4618FACEF35ACA629355BAC288556E7B6|YtiB]: (32%)

Expression and Regulation

Operons

• genes: [gene|CCDDC414E266D86B9027EA67EA565D87357023B3|ndhF]-[gene|E04C67FB0EA3FFEC8FB68440F4661505C3DFDA29|ybcC]-[gene|5D96DF2F32050BBCEC3811843398FE84DE88F6DF|ybcF]-[gene|EBE0360D89E50EEBB84CC853C6E4B4053DBF8925|ybcH]-[gene|6E063903E9E3B770CAACA9DF98DFA540FAE6FD3D|ybcI]
  description: [Pubmed|22383849]

Biological materials

Mutant

• BKE01860 ([gene|5D96DF2F32050BBCEC3811843398FE84DE88F6DF|ybcF]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE01860 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATACAGCACACCTCTTCCT, downstream forward: _UP4_TGATGAAATGCAGGTTTAAC
• BKK01860 ([gene|5D96DF2F32050BBCEC3811843398FE84DE88F6DF|ybcF]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK01860 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATACAGCACACCTCTTCCT, downstream forward: _UP4_TGATGAAATGCAGGTTTAAC