SubtiBank SubtiBank
yojF
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yojF

unknown
locus
BSU_19470
pI
7.32
mw
12.90 kDa
protein length
116 aa Sequence Blast
gene length
351 bp Sequence Blast
function
unknown
product
unknown
essential
no
synonyms

Genomic Context

      

categories

  • [category|SW 6|Groups of genes] → [category|SW 6.7|Proteins of unknown function]
  • Gene

    Coordinates
    2,122,325 2,122,675

    The protein

    Structure

  • [PDB|1NJH]
  • Expression and Regulation

    Operons

    genes
    [gene|7922A49FBC7CCDC8C585EF6E67D7CC9CC91059F7|yoyC]-[gene|63EC848DB7CC4464B070E65D2C9288851B08BBE3|yojF]-[gene|8106404D9D2CFA0825E1284D47CC7198D8A20E5D|bshB2]
    description
    (major transcript) [Pubmed|23894131,20308541]

    sigma factors

  • [protein|360F48D576DE950DF79C1A2677B7A35A8D8CC30C|SigA]: sigma factor, [Pubmed|23894131], in [regulon|360F48D576DE950DF79C1A2677B7A35A8D8CC30C|SigA regulon]
  • regulatory mechanism

  • [protein|2C6386E9A63F410558D168798D077DF91590F454|Spx]: activation, [Pubmed|23894131], in [regulon|2C6386E9A63F410558D168798D077DF91590F454|Spx regulon]
  • regulation

  • ''[protein|search|yoyC]'': induced by diamide stess (thiol depletion) ([protein|search|Spx]) [Pubmed|23894131]
  • view in new tab

    genes
    [gene|FBF1A8C92149A216D8A46F9E02898D7C5C448E2A|yojE]-[gene|7922A49FBC7CCDC8C585EF6E67D7CC9CC91059F7|yoyC]-[gene|63EC848DB7CC4464B070E65D2C9288851B08BBE3|yojF]-[gene|8106404D9D2CFA0825E1284D47CC7198D8A20E5D|bshB2]
    description
    [Pubmed|23894131]

    sigma factors

  • [protein|360F48D576DE950DF79C1A2677B7A35A8D8CC30C|SigA]: sigma factor, [Pubmed|23894131], in [regulon|360F48D576DE950DF79C1A2677B7A35A8D8CC30C|SigA regulon]
  • regulation

  • ''[protein|search|yoyC]'': induced by diamide stess (thiol depletion) ([protein|search|Spx]) [Pubmed|23894131]
  • view in new tab

    Biological materials

    Mutant

  • MGNA-B429 (yojF::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1428 NBRP B. subtilis, Japan]
  • CS211 (''[gene|63EC848DB7CC4464B070E65D2C9288851B08BBE3|yojF]''::''aphA3'', available in [SW|Colin Harwood]'s and [SW|Jörg Stülke]'s labs) [Pubmed|27197833]
  • BKE19470 ([gene|63EC848DB7CC4464B070E65D2C9288851B08BBE3|yojF]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE19470 BGSC], [Pubmed|28189581], upstream reverse: _UP1_TTTCATGATTGCTCCCCTCT, downstream forward: _UP4_GTTTAAAGAAAAGGGTGAAT
  • BKK19470 ([gene|63EC848DB7CC4464B070E65D2C9288851B08BBE3|yojF]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK19470 BGSC], [Pubmed|28189581], upstream reverse: _UP1_TTTCATGATTGCTCCCCTCT, downstream forward: _UP4_GTTTAAAGAAAAGGGTGAAT
  • References

    Operon and expression

  • 20308541,23894131,27197833