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The 21st
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yojF
Genomic Context
categories
[category|SW 6|Groups of genes] → [category|SW 6.7|Proteins of unknown function]Gene
Coordinates
2,122,325 2,122,675
The protein
Expression and Regulation
Operons
genes
[gene|7922A49FBC7CCDC8C585EF6E67D7CC9CC91059F7|yoyC]-[gene|63EC848DB7CC4464B070E65D2C9288851B08BBE3|yojF]-[gene|8106404D9D2CFA0825E1284D47CC7198D8A20E5D|bshB2]
description
(major transcript) [Pubmed|23894131,20308541]
sigma factors
[protein|360F48D576DE950DF79C1A2677B7A35A8D8CC30C|SigA]: sigma factor, [Pubmed|23894131], in [regulon|360F48D576DE950DF79C1A2677B7A35A8D8CC30C|SigA regulon]regulatory mechanism
[protein|2C6386E9A63F410558D168798D077DF91590F454|Spx]: activation, [Pubmed|23894131], in [regulon|2C6386E9A63F410558D168798D077DF91590F454|Spx regulon]regulation
''[protein|search|yoyC]'': induced by diamide stess (thiol depletion) ([protein|search|Spx]) [Pubmed|23894131]view in new tabgenes
[gene|FBF1A8C92149A216D8A46F9E02898D7C5C448E2A|yojE]-[gene|7922A49FBC7CCDC8C585EF6E67D7CC9CC91059F7|yoyC]-[gene|63EC848DB7CC4464B070E65D2C9288851B08BBE3|yojF]-[gene|8106404D9D2CFA0825E1284D47CC7198D8A20E5D|bshB2]
description
[Pubmed|23894131]
sigma factors
[protein|360F48D576DE950DF79C1A2677B7A35A8D8CC30C|SigA]: sigma factor, [Pubmed|23894131], in [regulon|360F48D576DE950DF79C1A2677B7A35A8D8CC30C|SigA regulon]regulation
''[protein|search|yoyC]'': induced by diamide stess (thiol depletion) ([protein|search|Spx]) [Pubmed|23894131]view in new tabBiological materials
Mutant
MGNA-B429 (yojF::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1428 NBRP B. subtilis, Japan]CS211 (''[gene|63EC848DB7CC4464B070E65D2C9288851B08BBE3|yojF]''::''aphA3'', available in [SW|Colin Harwood]'s and [SW|Jörg Stülke]'s labs) [Pubmed|27197833]BKE19470 ([gene|63EC848DB7CC4464B070E65D2C9288851B08BBE3|yojF]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE19470 BGSC], [Pubmed|28189581], upstream reverse: _UP1_TTTCATGATTGCTCCCCTCT, downstream forward: _UP4_GTTTAAAGAAAAGGGTGAATBKK19470 ([gene|63EC848DB7CC4464B070E65D2C9288851B08BBE3|yojF]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK19470 BGSC], [Pubmed|28189581], upstream reverse: _UP1_TTTCATGATTGCTCCCCTCT, downstream forward: _UP4_GTTTAAAGAAAAGGGTGAATReferences
Operon and expression
20308541,23894131,27197833