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srfAA [Thu Dec 08 2016 16:30:06 GMT+0100 (CET)]
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srfAA [Thu Dec 08 2016 16:30:06 GMT+0100 (CET)]

surfactin synthetase / competence
locus
BSU03480
pI
4.00
mw
401.00 kDa
function
antibiotic synthesis
product
surfactin synthetase / competence
essential
no
synonyms
comL

Genomic Context

      

categories

  • [category|SW 2|Metabolism] → [category|SW 2.6|Additional metabolic pathways] → [category|SW 2.6.6|Miscellaneous metabolic pathways] → [category|SW 2.6.6.1|Biosynthesis of antibacterial compounds]
  • [category|SW 4|Lifestyles] → [category|SW 4.1|Exponential and early post-exponential lifestyles] → [category|SW 4.1.4|Swarming]
  • [category|SW 4|Lifestyles] → [category|SW 4.3|Coping with stress] → [category|SW 4.3.15|Biosynthesis of antibacterial compounds]
  • [category|SW 6|Groups of genes] → [category|SW 6.2|Membrane proteins]
  • [category|SW 6|Groups of genes] → [category|SW 6.4|Phosphoproteins] → [category|SW 6.4.1|Phosphorylation on an Arg residue]
  • [category|SW 6|Groups of genes] → [category|SW 6.4|Phosphoproteins] → [category|SW 6.4.5|Phosphorylation on a Ser residue]
  • [SW|Categories] containing this gene/protein

  • [SW|miscellaneous metabolic pathways], [SW|biosynthesis of antibacterial compounds], [SW|membrane proteins], [SW|phosphoproteins]
  • This gene is a member of the following [SW|regulons]

  • [SW|Abh regulon], [SW|CodY regulon], [SW|ComA regulon], [SW|PerR regulon], [SW|PhoP regulon], [SW|Spx regulon]
  • Gene

    Coordinates on the chromosome (coding sequence)
    376,968 -> 387,731

    Phenotypes of a mutant

  • altered cell death pattern in colonies [Pubmed|23012477]
  • reduced swarming of srfAA mutant of ''B. subtilis'' NCIB3610 [Pubmed|15066026]
  • The protein

    Protein family

  • ATP-dependent AMP-binding enzyme family (according to Swiss-Prot)
  • Modification

  • phosphorylation on Ser-1006 [Pubmed|17218307]
  • [SW|Localization]

  • membrane [Pubmed|18763711]
  • Expression and Regulation

    Operon

  • ''[SW|srfAA]-[SW|srfAB]-[protein|search|comS]-[SW|srfAC]-[SW|srfAD]'' [Pubmed|1715856]
  • [SW|Sigma factor]

  • [protein|search|SigA] [Pubmed|1715856]
  • Regulation

  • repressed during growth in the presence of branched chain amino acids ([protein|search|CodY]) [Pubmed|8830686]
  • repressed during hydrogen peroxide stress ([protein|search|PerR]) [Pubmed|16166527]
  • expressed at high cell density ([protein|search|ComA]) [Pubmed|16091051]
  • induced under conditions of phosphate limitation ([protein|search|PhoP]) [Pubmed|25666134]
  • Regulatory mechanism

  • [protein|search|PhoP]: transcription activation [Pubmed|25666134]
  • [protein|search|CodY]: transcription repression [Pubmed|8830686]
  • [protein|search|ComA]: transcription activation [Pubmed|1715856,16091051]
  • [protein|search|PerR]: transcription activation [Pubmed|16166527]
  • [protein|search|Spx]: transcription repression [Pubmed|12642660]
  • [protein|search|Abh]: transcription repression[Pubmed|20817675]
  • Additional information

  • A [protein|search|ncRNA] is predicted between '[protein|search|hxlR]' and '[protein|search|srfAA]' [PubMed|20525796]
  • expressed in all cells in a population [PubMed|25448819]
  • the mRNA is cleaved by [rnc|search|RNase III] [PubMed|26883633]
  • References

    Reviews

  • 20735481
  • Original publications

  • 8288534,8387999,1938922,16166527,17227471,8825779,8830686,18763711,17218307,17190806,1715856,19605685,19826092,12642660,20148996,16091051,20797616,20525796,21821766,23012477,22511326,20817675,15066026,24425772,25448819,25666134,26582911,26953743,26883633