SubtiBank SubtiBank
ypuC/1
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ypuC/1

part of the ypuC pseudogene
locus
BSU_23329
pI
0.00
mw
0.00 kDa
protein length
84 aa Sequence Blast
gene length
255 bp Sequence Blast
function
unknown
product
unknown
essential
no
synonyms
Outlinks
KEGGBsubCycExpression Browser

Genomic Context

      

categories

  • [category|SW 6|Groups of genes] → [category|SW 6.10|Pseudogenes]

    • Gene

    Coordinates
    2,433,631 2,433,885

    Expression and Regulation

    Operons

    genes
    [gene|BD57DC17917E229BD315C56A6726C8235E77311B|ypuB]-[gene|8C3F29CD95F72D29A00240C305689117D94876E9|ypuC/1]-[gene|E635BA05792D1FEEC9710F197F7231E5CAC71737|ypuC/2]
    description
    [pubmed|22383849]

    sigma factors

  • [protein|580011DE5DC40EC9E7E0512791D328FAA010DCB8|SigB]: sigma factor, [Pubmed|10482513], in [regulon|580011DE5DC40EC9E7E0512791D328FAA010DCB8|SigB regulon]
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    genes
    [gene|BD57DC17917E229BD315C56A6726C8235E77311B|ypuB]-[gene|8C3F29CD95F72D29A00240C305689117D94876E9|ypuC/1]
    description
    [Pubmed|10482513]

    sigma factors

  • [protein|580011DE5DC40EC9E7E0512791D328FAA010DCB8|SigB]: sigma factor, [Pubmed|10482513], in [regulon|580011DE5DC40EC9E7E0512791D328FAA010DCB8|SigB regulon]

    • regulation

  • expressed under stress conditions ([protein|search|SigB]) [Pubmed|10482513]
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    Biological materials

    Mutant

  • BKE23329 ([gene|8C3F29CD95F72D29A00240C305689117D94876E9|ypuC/1]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE23329 BGSC], [Pubmed|28189581], upstream reverse: _UP1_AAAATGACAAATGCCGTTAA, downstream forward: _UP4_TAGTATGTAATCAAAATTAA
  • BKK23329 ([gene|8C3F29CD95F72D29A00240C305689117D94876E9|ypuC/1]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK23329 BGSC], [Pubmed|28189581], upstream reverse: _UP1_AAAATGACAAATGCCGTTAA, downstream forward: _UP4_TAGTATGTAATCAAAATTAA

    • References

  • 10482513