SubtiBank SubtiBank
yhdB
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yhdB

unknown
locus
BSU_09350
pI
4.61
mw
9.66 kDa
protein length
gene length
243 bp Sequence Blast
function
unknown
product
unknown
essential
no
synonyms

Genomic Context

      

categories

  • [category|SW 4|Lifestyles] → [category|SW 4.2|Sporulation] → [category|SW 4.2.1|Sporulation proteins] → [category|SW 4.2.1.5|Newly identified sporulation proteins (based on transcription profiling)]
  • Gene

    Coordinates
    1,010,984 1,011,226

    Expression and Regulation

    Operons

    genes
    [gene|9643E3B999C9E273B050302F1ADAF088ECAEB400|yhdB]
    description
    [Pubmed|22383849]

    sigma factors

  • [protein|5F24258282F3166B7696B9E9ABC1706E4D06C944|SigG]: sigma factor, [pubmed|30782632], in [regulon|5F24258282F3166B7696B9E9ABC1706E4D06C944|SigG regulon]
  • regulation
    expressed during [SW|sporulation] ([protein|5F24258282F3166B7696B9E9ABC1706E4D06C944|SigG]) [Pubmed|22383849]
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    additional information

  • the mRNA belongs to the 46 most abundant mRNA species in dormant spores [pubmed|30782632]
  • Biological materials

    Mutant

  • MGNA-A690 (yhdB::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/690 NBRP B. subtilis, Japan]
  • BKE09350 ([gene|9643E3B999C9E273B050302F1ADAF088ECAEB400|yhdB]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE09350 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATGAATCGCTTCTCCTTTC, downstream forward: _UP4_CTCACATAAACAAATCCCGG
  • BKK09350 ([gene|9643E3B999C9E273B050302F1ADAF088ECAEB400|yhdB]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK09350 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATGAATCGCTTCTCCTTTC, downstream forward: _UP4_CTCACATAAACAAATCCCGG
  • References

    Research papers

  • 30782632