SubtiBank SubtiBank
ytbD
SAVE THE DATE! 21st International Conference on Bacilli and Gram-Positive Bacteria. Prague, Czech Republic, June 7-11, 2021.

ytbD

similar to antibiotic resistance protein
locus
BSU_29040
pI
9.89
mw
41.47 kDa
protein length
396 aa Sequence Blast
gene length
1191 bp Sequence Blast
function
unknown
product
unknown
essential
no
synonyms

Genomic Context

      

categories

  • [category|SW 4|Lifestyles] → [category|SW 4.3|Coping with stress] → [category|SW 4.3.14|Resistance against toxins/ antibiotics/ based on similarity]
  • [category|SW 6|Groups of genes] → [category|SW 6.2|Membrane proteins]
  • Gene

    Coordinates
    2,968,824 → 2,970,014

    The protein

    Protein family

  • [SW|major facilitator superfamily] (according to UniProt)
  • [SW|Localization]

  • cell membrane (according to UniProt)
  • Expression and Regulation

    Operons

    genes
    [gene|BADE5937ECB41C96C82E6A3BDA8FDC9BFC21F219|ytbD]-[gene|DE12190315DADF13DA1BA272924729BBF909B1D9|ytbE]
    description
    [pubmed|22383849]
    view in new tab

    Biological materials

    Mutant

  • MGNA-A004 (ytbD::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/4 NBRP B. subtilis, Japan]
  • BKE29040 (Δ[gene|BADE5937ECB41C96C82E6A3BDA8FDC9BFC21F219|ytbD]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE29040 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATGATGTTCCTCCTTTGTA, downstream forward: _UP4_TGACAATTTTAAAGGAGGAA
  • BKK29040 (Δ[gene|BADE5937ECB41C96C82E6A3BDA8FDC9BFC21F219|ytbD]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK29040 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATGATGTTCCTCCTTTGTA, downstream forward: _UP4_TGACAATTTTAAAGGAGGAA