SAVE THE DATE! 21st International Conference on Bacilli and Gram-Positive Bacteria. Prague, Czech Republic, June 7-11, 2021.

ybzH

putative transcriptional regulator ([SW|ArsR family])

locus: BSU_01889

pI: 6.73

mw: 12.00 kDa

protein length: 100 aa

gene length: 303 bp

function: unknown

product: putative transcriptional regulator ([SW|ArsR family])

essential: -

synonyms

Genomic Context

categories

• [category|SW 3|Information processing] → [category|SW 3.4|Regulation of gene expression] → [category|SW 3.4.2|Transcription factors and their control] → [category|SW 3.4.2.6|Transcription factor/ other/ based on similarity]
• [category|SW 5|Prophages and mobile genetic elements] → [category|SW 5.1|Prophages] → [category|SW 5.1.4|Prophage 1]

Gene

Coordinates: 211,429 → 211,731

The protein

Protein family

• [SW|ArsR family]

[SW|Domains]

• [SW|HTH arsR-type domain] (aa 1-100) (according to UniProt)

Structure

• [PDB|3FWL] (PBP1B from E. coli, 30% identity) [pubmed|19458048]

Expression and Regulation

Operons

• genes: [gene|C26EAFC9DC4A930F1887E0B99770F5F386A407D3|ybzH]
  description: [pubmed|22383849]

Biological materials

Mutant

• BKE01889 (Δ[gene|C26EAFC9DC4A930F1887E0B99770F5F386A407D3|ybzH]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE01889 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATATCGATTATTATATCGT, downstream forward: _UP4_TAAAAATAAACATCAAAAGA
• BKK01889 (Δ[gene|C26EAFC9DC4A930F1887E0B99770F5F386A407D3|ybzH]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK01889 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATATCGATTATTATATCGT, downstream forward: _UP4_TAAAAATAAACATCAAAAGA

References

• 23504016,19458048