SubtiBank SubtiBank
ydgJ
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ydgJ

similar to transcriptional regulator ([SW|MarR family])
locus
BSU_05670
pI
9.35
mw
18.66 kDa
protein length
164 aa Sequence Blast
gene length
495 bp Sequence Blast
function
unknown
product
unknown
essential
no
synonyms

Genomic Context

      

categories

  • [category|SW 3|Information processing] → [category|SW 3.4|Regulation of gene expression] → [category|SW 3.4.2|Transcription factors and their control] → [category|SW 3.4.2.6|Transcription factor/ other/ based on similarity]
  • Gene

    Coordinates
    612,836 → 613,330

    The protein

    Protein family

  • [SW|MarR family]
  • Expression and Regulation

    Operons

    genes
    [gene|E8D1416DB588A4D72E84341F5EAB845E77A84792|ydgJ]-[gene|8EE3F368AB1CD4BB14E42135D63D27138D3FED03|ydgI]
    description
    [Pubmed|22383849]
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    Biological materials

    Mutant

  • MGNA-C162 (ydgJ::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/2160 NBRP B. subtilis, Japan]
  • BKE05670 (Δ[gene|E8D1416DB588A4D72E84341F5EAB845E77A84792|ydgJ]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE05670 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CAATTAATATACAACGATTG, downstream forward: _UP4_GAAGCTTAAGAGGAGTGTAT
  • BKK05670 (Δ[gene|E8D1416DB588A4D72E84341F5EAB845E77A84792|ydgJ]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK05670 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CAATTAATATACAACGATTG, downstream forward: _UP4_GAAGCTTAAGAGGAGTGTAT