SubtiBank SubtiBank
ylbD
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ylbD

outer spore coat protein
locus
BSU_14970
pI
7.38
mw
15.14 kDa
protein length
132 aa Sequence Blast
gene length
399 bp Sequence Blast
function
protection of the spore
product
spore coat protein
essential
no
synonyms

Genomic Context

      

categories

  • [category|SW 4|Lifestyles] → [category|SW 4.2|Sporulation] → [category|SW 4.2.1|Sporulation proteins] → [category|SW 4.2.1.1|Spore coat proteins] → [category|SW 4.2.1.1.5|Class V]
  • Gene

    Coordinates
    1,567,651 → 1,568,049

    The protein

    [SW|Localization]

  • outer spore coat, localization depends on [protein|825AD8D4315A85CD384F9AF6AD894E38E57C88F7|CotE] [Pubmed|22171814]
  • Expression and Regulation

    Operons

    genes
    [gene|ECD40F139D57B159A54E660ABD0D92629490AE8D|ylbD]-[gene|C7FDE0BE621C48E2F8D7B00532403CA7D8B44660|ylbE]
    description
    [Pubmed|22383849]

    sigma factors

  • [protein|24F7FD5C7C3A68BB2760ABB8CBD8FBD65E5FF7D4|SigK]: sigma factor, [Pubmed|15699190,15383836], in [regulon|24F7FD5C7C3A68BB2760ABB8CBD8FBD65E5FF7D4|SigK regulon]
  • regulatory mechanism

  • [protein|19228BAD44E6DA3DE908DC390FDF628C18D94E65|GerE]: activation, [Pubmed|15383836], in [regulon|19228BAD44E6DA3DE908DC390FDF628C18D94E65|GerE regulon]
  • regulation

  • expressed late during sporulation in the mother cell ([protein|search|SigK], [protein|search|GerE]) [Pubmed|15699190,15383836]
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    Biological materials

    Mutant

  • MGNA-B359 (ylbD::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1358 NBRP B. subtilis, Japan]
  • BKE14970 (Δ[gene|ECD40F139D57B159A54E660ABD0D92629490AE8D|ylbD]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE14970 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CACAATCCTCACCCCCTCCG, downstream forward: _UP4_AAGGATTAAAAAAGGGGAGC
  • BKK14970 (Δ[gene|ECD40F139D57B159A54E660ABD0D92629490AE8D|ylbD]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK14970 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CACAATCCTCACCCCCTCCG, downstream forward: _UP4_AAGGATTAAAAAAGGGGAGC
  • References

  • 15699190,15383836,22171814,22383849