yvcD

unknown

locus: BSU_34810

pI: 4.68

mw: 55.21 kDa

protein length: 484 aa

gene length: 1455 bp

function: unknown

product: unknown

essential: no

synonyms

Genomic Context

categories

• [category|SW 6|Groups of genes] → [category|SW 6.7|Proteins of unknown function]

Gene

Coordinates: 3,576,165 → 3,577,619

The protein

[SW|Domains]

• three [SW|TPR repeat|tetratrichopeptide repeats] (according to UniProt)

Expression and Regulation

Operons

• genes: [gene|ED1F82463BAA28B67184BFAB5CB23CF26A62999D|bmrA]-[gene|EFF0635A4BBB62558A04BA49195D76234776F943|yvcD]
  description: [pubmed|22383849]

  sigma factors

  • [protein|360F48D576DE950DF79C1A2677B7A35A8D8CC30C|SigA]: sigma factor, [Pubmed|21077936], in [regulon|360F48D576DE950DF79C1A2677B7A35A8D8CC30C|SigA regulon]

  regulation

  • constitutively expressed [Pubmed|21077936]

  additional information

  • half-life of the mRNA: 1.5 min [PubMed|21077936]

Biological materials

Mutant

• MGNA-B644 (yvcD::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1643 NBRP B. subtilis, Japan]
• BKE34810 (Δ[gene|EFF0635A4BBB62558A04BA49195D76234776F943|yvcD]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE34810 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CACAACTACCCTCCGTTTTA, downstream forward: _UP4_TAGTAAATTTTAAAGAGTTG
• BKK34810 (Δ[gene|EFF0635A4BBB62558A04BA49195D76234776F943|yvcD]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK34810 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CACAACTACCCTCCGTTTTA, downstream forward: _UP4_TAGTAAATTTTAAAGAGTTG

References

• 16479537