gerW

gerW
168

germination protein

locus
BSU_29500
Molecular weight
16.20 kDa
pI
4.99
Protein length
Gene length
function
unknown
product
germination protein
essential
no
ec
null
synonyms
gerW, ytfJ

Genomic Context

Categories containing this gene/protein

List of homologs in different organisms, belongs to COG3874 (Galperin et al., 2021)

This gene is a member of the following regulons

Gene
Coordinates
3,018,309  3,018,764
Phenotypes of a mutant
no [wiki|germination] in response to l-alanine [Pubmed|23921501], this has been disputed [Pubmed|25790435]
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The protein
Structure
[AF|O34806]
Modification
phosphorylated on Arg-125 [pubmed|31221751]
[wiki|Localization]
in the dormant spore [Pubmed|23921501]
Expression and Regulation
Operons
genes
[gene|9F7A754B2867CED5CDF3F06009DF5DBDD0877BAF|ytfI]-[gene|1FDD81F50B0B0F260A638FECD9B92F8A5F5ED126|gerW]
description
[Pubmed|9387221]
regulation
expressed early during sporulation in the forespore ([protein|search|SigF]) [Pubmed|16497325]
sigma factors
[protein|CFF318EE6CACDEE763FBF96A2ABB46E944679AAA|sigF]: sigma factor, [Pubmed|23921501,16497325], in [regulon|protein:CFF318EE6CACDEE763FBF96A2ABB46E944679AAA|sigF regulon]
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[gene|9F7A754B2867CED5CDF3F06009DF5DBDD0877BAF|ytfI]→[gene|1FDD81F50B0B0F260A638FECD9B92F8A5F5ED126|gerW]

2024-03-14 12:07:05

ghost

44

fdc9c1ddee09db27a0892ab44486306b07118c82

8DEA26EB2F2E8873D4D4BCF071DE8AB3CD774943

Biological materials
Mutant
MGNA-A112 (ytfJ::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/112 NBRP B. subtilis, Japan]
BKE29500 ([gene|1FDD81F50B0B0F260A638FECD9B92F8A5F5ED126|gerW]::erm  trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKE29500 BGSC],  [Pubmed|28189581], upstream reverse: _UP1_ATGGTCTGCCATATACGCTT,  downstream forward: _UP4_TAAAAAAAGGTTAACTGCGC
BKK29500 ([gene|1FDD81F50B0B0F260A638FECD9B92F8A5F5ED126|gerW]::kan  trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKK29500 BGSC],  [Pubmed|28189581], upstream reverse: _UP1_ATGGTCTGCCATATACGCTT,  downstream forward: _UP4_TAAAAAAAGGTTAACTGCGC
References
16497325,9387221,12107147,23921501,25790435,31221751,35638784

1FDD81F50B0B0F260A638FECD9B92F8A5F5ED126

Page visits: 3927

Time of last update: 2024-03-28 20:53:07

Author of last update: Jstuelk