yjdI

yjdI
168

similiar to Cys-tRNA(Pro) and Cys-tRNA(Cys) deacylase

locus
BSU_12060
Molecular weight
17.12 kDa
pI
8.76
Protein length
Gene length
function
maturation of tRNA
product
Cys-tRNA(Pro) and Cys-tRNA(Cys) deacylase
essential
no
synonyms
yjdI

Genomic Context

Categories containing this gene/protein

List of homologs in different organisms, belongs to COG2606 (Galperin et al., 2021)

This gene is a member of the following regulons

Gene
Coordinates
1,277,686  1,278,165
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The protein
Protein family
prolyl-tRNA editing family (single member, according to UniProt)
Structure
[PDB|2DXA] (from E. coli, 44% identity)
[AF|O31650]
Expression and Regulation
Operons
genes
[gene|95AAF457B155A56DBD63D0AAB7C986AFBEC5ADEF|yjdI]
description
[Pubmed|22383849]
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[gene|95AAF457B155A56DBD63D0AAB7C986AFBEC5ADEF|yjdI]

2024-02-16 20:53:14

Jstuelk

32

2e3fffa06a33287e8a762f11213538ab9a26e56a

D3FC3945F185D60513E8F5E6C8D4615C5F2481D2

Biological materials
Mutant
MGNA-A257 (yjdI::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/257 NBRP B. subtilis, Japan]
BKE12060 ([gene|95AAF457B155A56DBD63D0AAB7C986AFBEC5ADEF|yjdI]::erm  trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKE12060 BGSC],  [Pubmed|28189581], upstream reverse: _UP1_CATTGTTTTCACCCACTATC,  downstream forward: _UP4_TAGATGCAGATATAGGGGAA
BKK12060 ([gene|95AAF457B155A56DBD63D0AAB7C986AFBEC5ADEF|yjdI]::kan  trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKK12060 BGSC],  [Pubmed|28189581], upstream reverse: _UP1_CATTGTTTTCACCCACTATC,  downstream forward: _UP4_TAGATGCAGATATAGGGGAA
References
15886196,14530268,16087664,24371276

95AAF457B155A56DBD63D0AAB7C986AFBEC5ADEF

Page visits: 1934

Time of last update: 2024-03-28 19:55:01

Author of last update: Melvin.boenninger