yocK

168

general stress protein

locus: BSU_19240

Molecular weight: 24.00 kDa

pI: 4.7

Protein length: 163 aa

Gene length: 492 bp

function: survival of ethanol stress

product: general stress protein

essential: no

ec: null

synonyms: yocK

List of homologs in different organisms, belongs to COG1734 (Galperin et al., 2021)

Gene

Coordinates: 2,097,126  2,097,617

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The protein

Structure

• [AF|P80872]

Paralogous protein(s)

• [protein|70A5A147B908001878161D45AAEB08132AD0DB8C|yteA], [protein|8AB50581EBB3C27BB9A96EA3382F8C90CE5B6EC5|ylyA]

Expression and Regulation

Operons

• genes: [gene|633F6F54AFA144D4F65EA36B8D5670D3FC25EDA6|yocK]

  description: [Pubmed|10220166]

  regulation

  • induced by stress ([protein|search|SigB]) [Pubmed|10220166,15805528]

  sigma factors

  • [protein|580011DE5DC40EC9E7E0512791D328FAA010DCB8|sigB]: sigma factor, [Pubmed|10220166,15805528], in [regulon|protein:580011DE5DC40EC9E7E0512791D328FAA010DCB8|sigB regulon]

Biological materials

Mutant

• MGNA-A322 (yocK::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/322 NBRP B. subtilis, Japan]
• BKE19240 ([gene|633F6F54AFA144D4F65EA36B8D5670D3FC25EDA6|yocK]::erm  trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKE19240 BGSC],  [Pubmed|28189581], upstream reverse: _UP1_CATGTATATCCTCTCCTTTC,  downstream forward: _UP4_TAAAAATGCCAAGCAAGTAC
• BKK19240 ([gene|633F6F54AFA144D4F65EA36B8D5670D3FC25EDA6|yocK]::kan  trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKK19240 BGSC],  [Pubmed|28189581], upstream reverse: _UP1_CATGTATATCCTCTCCTTTC,  downstream forward: _UP4_TAAAAATGCCAAGCAAGTAC

References

• 10220166,15805528