Difference between revisions of "YthB"

From SubtiWiki
Jump to: navigation, search
Line 18: Line 18:
 
|style="background:#ABCDEF;" align="center"| '''Gene length, protein length''' || 1038 bp, 346 aa  
 
|style="background:#ABCDEF;" align="center"| '''Gene length, protein length''' || 1038 bp, 346 aa  
 
|-
 
|-
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[ythA]]'', ''[[ythC]]''
+
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[ythA]]'', ''[[mntD]]''
 
|-
 
|-
 
|colspan="2" style="background:#FAF8CC;" align="center"|'''Get the DNA and protein [http://srs.ebi.ac.uk/srsbin/cgi-bin/wgetz?-e+&#91;EMBLCDS:CAB15050&#93;+-newId sequences] <br/> (Barbe ''et al.'', 2009)'''
 
|colspan="2" style="background:#FAF8CC;" align="center"|'''Get the DNA and protein [http://srs.ebi.ac.uk/srsbin/cgi-bin/wgetz?-e+&#91;EMBLCDS:CAB15050&#93;+-newId sequences] <br/> (Barbe ''et al.'', 2009)'''

Revision as of 20:39, 19 December 2009

  • Description: cytochrome bd2, menaquinol oxidase (7:1 protons)

Gene name ythB
Synonyms
Essential no
Product cytochrome bd2, menaquinol oxidase (7:1 protons)
Function respiration
MW, pI 38 kDa, 9.18
Gene length, protein length 1038 bp, 346 aa
Immediate neighbours ythA, mntD
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YthB context.gif
This image was kindly provided by SubtiList



The gene

Basic information

  • Locus tag: BSU30720

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization:

Database entries

  • Structure:
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Operon:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

L Winstedt, C von Wachenfeldt
Terminal oxidases of Bacillus subtilis strain 168: one quinol oxidase, cytochrome aa(3) or cytochrome bd, is required for aerobic growth.
J Bacteriol: 2000, 182(23);6557-64
[PubMed:11073895] [WorldCat.org] [DOI] (P p)

N Azarkina, S Siletsky, V Borisov, C von Wachenfeldt, L Hederstedt, A A Konstantinov
A cytochrome bb'-type quinol oxidase in Bacillus subtilis strain 168.
J Biol Chem: 1999, 274(46);32810-7
[PubMed:10551842] [WorldCat.org] [DOI] (P p)