Difference between revisions of "YdiF"

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=== Additional information===
 
=== Additional information===
 
 
 
  
 
=The protein=
 
=The protein=
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* '''Additional information:'''  
 
* '''Additional information:'''  
 +
** An [[ncRNA|antisense RNA]] is predicted for ''[[ydiF]]'' {{PubMed|20525796}}
  
 
=Biological materials =
 
=Biological materials =
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=References=
 
=References=
  
<pubmed>10092453,, </pubmed>
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<pubmed>10092453,20525796, </pubmed>
  
 
[[Category:Protein-coding genes]]
 
[[Category:Protein-coding genes]]

Revision as of 19:38, 4 May 2011

Gene name ydiF
Synonyms
Essential no
Product ABC transporter (ATP-binding protein)
Function unknown
MW, pI 73 kDa, 4.868
Gene length, protein length 1926 bp, 642 aa
Immediate neighbours gcp, ydiG
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YdiF context.gif
This image was kindly provided by SubtiList



Categories containing this gene/protein

ABC transporters

This gene is a member of the following regulons

The gene

Basic information

  • Locus tag: BSU05950

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: EF3 subfamily (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization:

Database entries

  • Structure:
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Operon:
  • Regulation:
  • Regulatory mechanism:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Irnov Irnov, Cynthia M Sharma, Jörg Vogel, Wade C Winkler
Identification of regulatory RNAs in Bacillus subtilis.
Nucleic Acids Res: 2010, 38(19);6637-51
[PubMed:20525796] [WorldCat.org] [DOI] (I p)

Y Quentin, G Fichant, F Denizot
Inventory, assembly and analysis of Bacillus subtilis ABC transport systems.
J Mol Biol: 1999, 287(3);467-84
[PubMed:10092453] [WorldCat.org] [DOI] (P p)