Difference between revisions of "YabP"

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m (Reverted edits by 134.76.70.252 (talk) to last revision by Jstuelk)
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* '''Description:''' required for sporulation at a late stage<br/><br/>
  
 
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|style="background:#ABCDEF;" align="center"|'''Function''' || sporulation
 
|style="background:#ABCDEF;" align="center"|'''Function''' || sporulation
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|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://cellpublisher.gobics.de/subtiexpress/ ''Subti''Express]''': [http://cellpublisher.gobics.de/subtiexpress/bsu/BSU00600 yabP]
 
 
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|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 11 kDa, 6.341   
 
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 11 kDa, 6.341   
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|colspan="2" | '''Genetic context''' <br/> [[Image:yabP_context.gif]]
 
|colspan="2" | '''Genetic context''' <br/> [[Image:yabP_context.gif]]
 
  <div align="right"> <small>This image was kindly provided by [http://genolist.pasteur.fr/SubtiList/ SubtiList]</small></div>
 
  <div align="right"> <small>This image was kindly provided by [http://genolist.pasteur.fr/SubtiList/ SubtiList]</small></div>
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|colspan="2" |'''[http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=yabP_68216_68518_1 Expression at a glance]'''&#160;&#160;&#160;{{PubMed|22383849}}<br/>[[Image:yabP_expression.png|500px]]
 
 
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__TOC__
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** ''[[yabP]]-[[yabQ]]-[[divIC]]-[[yabR]]'' {{PubMed|11283287}}
 
** ''[[yabP]]-[[yabQ]]-[[divIC]]-[[yabR]]'' {{PubMed|11283287}}
  
* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=yabP_68216_68518_1 yabP] {{PubMed|22383849}}
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* '''[[Sigma factor]]:''' [[SigE]] {{PubMed|15699190}}
 
 
* '''Sigma factor:''' [[SigE]] {{PubMed|15699190}}
 
 
** ''[[yabM]]'': unknown
 
** ''[[yabM]]'': unknown
 
** ''[[yabP]]'': [[SigE]] {{PubMed|11283287}}
 
** ''[[yabP]]'': [[SigE]] {{PubMed|11283287}}

Revision as of 10:12, 7 August 2012

  • Description: required for sporulation at a late stage

Gene name yabP
Synonyms
Essential no
Product unknown
Function sporulation
MW, pI 11 kDa, 6.341
Gene length, protein length 300 bp, 100 aa
Immediate neighbours yabO, yabQ
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YabP context.gif
This image was kindly provided by SubtiList



Categories containing this gene/protein

sporulation proteins, membrane proteins

This gene is a member of the following regulons

SigE regulon

The gene

Basic information

  • Locus tag: BSU00600

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Localization: forespore outer membrane (according to Swiss-Prot)

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation: expressed during sporulation (SigE) PubMed
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Christiaan van Ooij, Patrick Eichenberger, Richard Losick
Dynamic patterns of subcellular protein localization during spore coat morphogenesis in Bacillus subtilis.
J Bacteriol: 2004, 186(14);4441-8
[PubMed:15231775] [WorldCat.org] [DOI] (P p)

Kei Asai, Hiromu Takamatsu, Megumi Iwano, Takeko Kodama, Kazuhito Watabe, Naotake Ogasawara
The Bacillus subtilis yabQ gene is essential for formation of the spore cortex.
Microbiology (Reading): 2001, 147(Pt 4);919-927
[PubMed:11283287] [WorldCat.org] [DOI] (P p)

P Fawcett, P Eichenberger, R Losick, P Youngman
The transcriptional profile of early to middle sporulation in Bacillus subtilis.
Proc Natl Acad Sci U S A: 2000, 97(14);8063-8
[PubMed:10869437] [WorldCat.org] [DOI] (P p)