Difference between revisions of "DctB"

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m (Reverted edits by 134.76.70.252 (talk) to last revision by Jstuelk)
m (Reverted edits by Jstuelk (talk) to last revision by 134.76.70.252)
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* '''Description:''' C4-dicarboxylate binding protein <br/><br/>
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|style="background:#ABCDEF;" align="center"|'''Function''' || uptake of C4-dicarboxylates  
 
|style="background:#ABCDEF;" align="center"|'''Function''' || uptake of C4-dicarboxylates  
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|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://cellpublisher.gobics.de/subtiexpress/ ''Subti''Express]''': [http://cellpublisher.gobics.de/subtiexpress/bsu/BSU04440 dctB]
 
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|colspan="2" style="background:#FAF8CC;" align="center"| '''Metabolic function and regulation of this protein in [[SubtiPathways|''Subti''Pathways]]: <br/>[http://subtiwiki.uni-goettingen.de/pathways/carbon_flow.html Central C-metabolism]'''
 
|colspan="2" style="background:#FAF8CC;" align="center"| '''Metabolic function and regulation of this protein in [[SubtiPathways|''Subti''Pathways]]: <br/>[http://subtiwiki.uni-goettingen.de/pathways/carbon_flow.html Central C-metabolism]'''
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|colspan="2" | '''Genetic context''' <br/> [[Image:dctB_context.gif]]
 
|colspan="2" | '''Genetic context''' <br/> [[Image:dctB_context.gif]]
 
  <div align="right"> <small>This image was kindly provided by [http://genolist.pasteur.fr/SubtiList/ SubtiList]</small></div>
 
  <div align="right"> <small>This image was kindly provided by [http://genolist.pasteur.fr/SubtiList/ SubtiList]</small></div>
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|colspan="2" |'''[http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=dctB_496646_497698_-1 Expression at a glance]'''&#160;&#160;&#160;{{PubMed|22383849}}<br/>[[Image:dctB_expression.png|500px]]
 
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__TOC__
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* '''Operon:''' ''[[dctB]]-[[ydbD]]'' {{PubMed|10708364}}
 
* '''Operon:''' ''[[dctB]]-[[ydbD]]'' {{PubMed|10708364}}
  
* '''[[Sigma factor]]:'''  
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* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=dctB_496646_497698_-1 dctB] {{PubMed|22383849}}
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* '''Sigma factor:'''  
  
 
* '''Regulation:'''  
 
* '''Regulation:'''  
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* '''Regulatory mechanism:'''  
 
* '''Regulatory mechanism:'''  
  
* '''Additional information:'''  
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* '''Additional information:'''
  
 
=Biological materials =
 
=Biological materials =

Revision as of 11:52, 7 August 2012


Gene name dctB
Synonyms ydbE
Essential no
Product C4-dicarboxylate binding protein
Function uptake of C4-dicarboxylates
Gene expression levels in SubtiExpress: dctB
Metabolic function and regulation of this protein in SubtiPathways:
Central C-metabolism
MW, pI 39 kDa, 4.889
Gene length, protein length 1050 bp, 350 aa
Immediate neighbours ydbD, dctS
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
DctB context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
DctB expression.png




























Categories containing this gene/protein

transporters/ other, utilization of specific carbon sources

This gene is a member of the following regulons

The gene

Basic information

  • Locus tag: BSU04440

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: bacterial solute-binding protein 7 family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Sigma factor:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Kei Asai, Sang-Hoon Baik, Yasuhiro Kasahara, Shigeki Moriya, Naotake Ogasawara
Regulation of the transport system for C4-dicarboxylic acids in Bacillus subtilis.
Microbiology (Reading): 2000, 146 ( Pt 2);263-271
[PubMed:10708364] [WorldCat.org] [DOI] (P p)