Difference between revisions of "CccA"

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* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=cccA_2599523_2599885_-1 cccA] {{PubMed|22383849}}
 
* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=cccA_2599523_2599885_-1 cccA] {{PubMed|22383849}}
  
* '''Sigma factor:''' [[SigA]]
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* '''Sigma factor:''' [[SigA]] {{PubMed|11361075}}
  
 
* '''Regulation:'''  
 
* '''Regulation:'''  
** carbon catabolite repression ([[CcpA]]) {{PubMed|22900538 ,11361075,12850135}}
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** carbon catabolite repression ([[CcpA]]) {{PubMed|22900538,11361075,12850135}}
  
 
* '''Regulatory mechanism:'''  
 
* '''Regulatory mechanism:'''  
** [[CcpA]]: transcription repression, cre site overlaps -35 region of the promoter [http://www.ncbi.nlm.nih.gov/sites/entrez/11361075 PubMed]
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** [[CcpA]]: transcription repression, cre site overlaps -35 region of the promoter {{PubMed|11361075}}
 
** [[AbrB]]: transcription repression {{PubMed|20817675}}
 
** [[AbrB]]: transcription repression {{PubMed|20817675}}
  

Revision as of 15:51, 21 August 2012

  • Description: cytochrome c550

Gene name cccA
Synonyms
Essential no
Product cytochrome c550
Function respiration
Gene expression levels in SubtiExpress: cccA
MW, pI 12 kDa, 5.276
Gene length, protein length 360 bp, 120 aa
Immediate neighbours trmK, sigA
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
CccA context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
500px















Categories containing this gene/protein

respiration

This gene is a member of the following regulons

CcpA regulon, AbrB regulon

The gene

Basic information

  • Locus tag: BSU25190

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation:
  • Regulatory mechanism:
    • CcpA: transcription repression, cre site overlaps -35 region of the promoter PubMed
    • AbrB: transcription repression PubMed
  • Additional information: the mRNA is very stable (half-life > 15 min) PubMed

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Additional publications: PubMed