Difference between revisions of "RimM"
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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[ylqD]]'', ''[[trmD]]'' | |style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[ylqD]]'', ''[[trmD]]'' | ||
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| − | |style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU16020 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU16020 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU16020 | + | |style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU16020 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU16020 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU16020 DNA_with_flanks] |
|- | |- | ||
|colspan="2" | '''Genetic context''' <br/> [[Image:rimM_context.gif]] | |colspan="2" | '''Genetic context''' <br/> [[Image:rimM_context.gif]] | ||
Revision as of 10:13, 14 May 2013
- Description: 16S rRNA processing protein, RNase
| Gene name | rimM |
| Synonyms | ylqE |
| Essential | no |
| Product | 16S rRNA processing protein, RNase |
| Function | maturation of 16S rRNA |
| Gene expression levels in SubtiExpress: rimM | |
| MW, pI | 20 kDa, 5.222 |
| Gene length, protein length | 522 bp, 174 aa |
| Immediate neighbours | ylqD, trmD |
| Sequences | Protein DNA DNA_with_flanks |
Genetic context 
This image was kindly provided by SubtiList
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Expression at a glance PubMed
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Contents
Categories containing this gene/protein
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU16020
Phenotypes of a mutant
Database entries
- DBTBS entry: no entry
- SubtiList entry: [1]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family: PRC barrel domain (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Localization: cytoplasm (according to Swiss-Prot)
Database entries
- Structure:
- UniProt: O31740
- KEGG entry: [2]
- E.C. number:
Additional information
Expression and regulation
- Operon:
- Sigma factor:
- Regulation:
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
