Difference between revisions of "Paper"

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==Daniel Reuß==
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* strongly repressed in response to glucose starvation in M9 medium {{PubMed|23033921}}: [[hupA]] [[cycC]]
Schmidl et al: PLOS Pathogens
 
<pubmed>21546586 10066529</pubmed>
 
  
[[PlsY]][[PlsX]]
+
==not yet in SubtiWiki==
[[ScpA]][[Smc]]
+
<pubmed>31239381  31237868
[[ScpB]]
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  31235516
[[Ffh]]
+
    31134210    31197963 31160399 31066113
[[Scr]]
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    31199835 31217292 </pubmed>
[[SucC]]
 
[[SucD]]
 
[[RecA]][[DprA]]
 
[[ClpY]][[ClpQ]]
 
[[EpsE]][[FliG]]
 
[[FlhA]][[FliJ]]
 
[[FliT]]
 
* CheC CheY
 
CheA
 
FliD FlhA
 
Hag
 
FliS
 
McpB  CheA 
 
CheC
 
McpB
 
CheD
 
FlgM
 
RecU RecA
 
CotC CotE
 
CotU
 
EbrA EbrB
 
NrdF NrdE
 
GlnR
 
* CotC  CotU 
 
YngE YngH
 
PhrK RapK
 
SdpC CsaA
 
DesR DesK
 
OdhA OdhB
 
YplP
 
ThyB DfrA
 
EzrA UgtP
 
TrpB  TrpA 
 
CarB CarA
 
*
 
SafA SpoIVA
 
Fer
 
RsiX
 
ResD ResE
 
ResB ResC
 
ScpA ScpB
 
RibE RibH
 
SpoIIAA
 
SpoIIP SpoIIM
 
BkdR
 
Spo0B
 
* BofC 
 
AccA AccC
 
AccD
 
AccB
 
SpoIIQ  SpoIIIAH 
 
SpoIIIJ SpoIIIAE
 
SinI
 
SlrA
 
SlrR PbpA
 
GlyQ GlyS
 
* DnaK DnaJ
 
SpoIID SpoIIP
 
KinB
 
SpoIVFB
 
TrxA  ArsC  YqaM
 
SpoIIIC
 
YrkP YrkQ
 
RsiV
 
*
 
MreD
 
ClpX
 
SdhA SdhB 
 
SdhC
 
UvrB UvrC
 
* PheS PheT
 
* LytS LytT
 
PhoP  PhoR 
 
AccD AccA
 
MotP MotS
 
* BceR BceS
 
KtrB KtrA
 
KinB PbpD
 
MalR MalK
 
MrpB MrpA
 
MrpC
 
MrpD
 
MrpE
 
MrpF
 
MrpG
 
* RapF 
 
ComP
 
RapD
 
RapK
 
DegS DegQ
 
IscU SufU
 
SufS
 
CssS CssR
 
LiaS LiaR
 
YvrG
 
* CopZ CopA
 
SdpR SdpI
 
YkzW
 
YvfT YvfU
 
RsbQ
 
AcoR
 
RocR
 
EpsA EpsB
 
SlrA SlrR
 
PsdS PsdR
 
UvrB 
 
* FliD FliT
 
FliS
 
RsmY CsrA
 
RapG DegU
 
CotG CotB
 
YwrA YwrB
 
TkmA
 
PtpZ
 
Ugd
 
* TuaD
 
Ssb
 
SsbB
 
Ldh
 
YvyG
 
YnfE
 
Asd
 
YorK
 
RapB
 
* RapE 
 
PhrE
 
PhrF RapF
 
LicC
 
*YxjL YxjM
 
YxdJ YxdK
 
* PhrG RapG
 
YycH YycI
 
WalR WalK   
 
ThdF GidA
 
RnpA
 
RnpB
 
GmuC
 
* SbcC  
 
RecG
 
YrvE
 
YrvN 
 
RecO
 
YqiB
 
Ung
 
YpbB
 
YrrC
 
* YycH WalK
 
YycI
 
CheB CheA
 
CheV
 
Tkt Tpi
 
SpoIISB SpoIISA
 
Soj Spo0J
 
YirB
 
RsbRB   
 
* RsbRC
 
GerAB GerAA
 
GerAC
 
ComGB ComGA
 
ComFA
 
ComGC
 
ComGD
 
ComGE
 
ComGG
 
ComGC ComC
 
ComGD
 
* ComGE
 
ComGG
 
ComGA ComEC
 
ComEA 
 
ComFA
 
CoiA
 
SsbB
 
DprA
 
RecA
 
CoiA SsbB
 
DprA
 
RecA
 
* TasA TapA
 
UreC DivIVA Maf
 
FtsW
 
RuvB RuvA
 
RecU
 
GerAC Lgt
 
GerBC GerBA
 
GerBB
 
GerKC GerKB
 
GerKC
 
GerKA
 
fer des
 
Fra SufU
 
RnpA
 
* CitT CitS
 
NdoA NdoAI
 
SpoIIQ SpoIIE
 
CymR CysK
 
PabA PabB
 
TrpE
 
* McsA CtsR
 
McsB
 
YpbH
 
RacA DisA
 
  
==not yet in SubtiWiki==
+
==POTM 2018==
<pubmed> 21636651</pubmed>
+
<pubmed>     </pubmed>
{{PubMed|}}
 
===sonst (nur Excel-Liste)===
 
  
==POTM==
+
== für Master-Seminar ==
* [http://www.ncbi.nlm.nih.gov/pubmed/21749987 Chi ''et al''.] demonstrate that S-bacillithiolation of the repressor [[OhrR]] and of four enzymes of the methionine biosynthesis pathway protects the ''B. subtilis'' cell against hypochlorite stress.
+
<pubmed>   24529384    20431016    24097941    22773139    21127214</pubmed>
<pubmed>21749987</pubmed>
 
* '''Relevant ''Subti''Wiki pages:'''  [[Haike Antelmann]], [[Dörte Becher]], [[Ulrike Mäder]], [[resistance against oxidative and electrophile stress]], [[Spx regulon]], [[CtsR regulon]], [[PerR regulon]], [[OhrR]], [[MetE]], [[YxjG]], [[PpaC]], [[SerA]], [[YphP]]
 

Latest revision as of 10:09, 6 April 2020

  • strongly repressed in response to glucose starvation in M9 medium PubMed: hupA cycC

not yet in SubtiWiki

Nikolai P Radzinski, Marina Besprozvannaya, Eric L McLean, Anusha Talwalkar, Briana M Burton
DNA-Membrane Anchor Facilitates Efficient Chromosome Translocation at a Distance in Bacillus subtilis.
mBio: 2019, 10(3);
[PubMed:31239381] [WorldCat.org] [DOI] (I e)

Katherine R Hummels, Daniel B Kearns
Suppressor mutations in ribosomal proteins and FliY restore Bacillus subtilis swarming motility in the absence of EF-P.
PLoS Genet: 2019, 15(6);e1008179
[PubMed:31237868] [WorldCat.org] [DOI] (I e)

Bentley Shuster, Mark Khemmani, Yusei Nakaya, Gudrun Holland, Keito Iwamoto, Kimihiro Abe, Daisuke Imamura, Nina Maryn, Adam Driks, Tsutomu Sato, Patrick Eichenberger
Expansion of the Spore Surface Polysaccharide Layer in Bacillus subtilis by Deletion of Genes Encoding Glycosyltransferases and Glucose Modification Enzymes.
J Bacteriol: 2019, 201(19);
[PubMed:31235516] [WorldCat.org] [DOI] (I e)

Sofia Arnaouteli, D A Matoz-Fernandez, Michael Porter, Margarita Kalamara, James Abbott, Cait E MacPhee, Fordyce A Davidson, Nicola R Stanley-Wall
##Title##
Proc Natl Acad Sci U S A: 2019, 116(27);13553-13562
[PubMed:31217292] [WorldCat.org] [DOI] (I p)

Cameron V Sayer, Bidisha Barat, David L Popham
Identification of L-Valine-initiated-germination-active genes in Bacillus subtilis using Tn-seq.
PLoS One: 2019, 14(6);e0218220
[PubMed:31199835] [WorldCat.org] [DOI] (I e)

Seoungjun Lee, Ling Juan Wu, Jeff Errington
Microfluidic time-lapse analysis and reevaluation of the Bacillus subtilis cell cycle.
Microbiologyopen: 2019, 8(10);e876
[PubMed:31197963] [WorldCat.org] [DOI] (I p)

Emily E Brown, Allyssa K Miller, Inna V Krieger, Ryan M Otto, James C Sacchettini, Jennifer K Herman
##Title##
J Bacteriol: 2019, 201(16);
[PubMed:31160399] [WorldCat.org] [DOI] (I e)

Björn Richts, Jonathan Rosenberg, Fabian M Commichau
##Title##
Front Mol Biosci: 2019, 6;32
[PubMed:31134210] [WorldCat.org] [DOI] (P e)

Natalí B Rasetto, Antonela Lavatelli, Natalia Martin, María Cecilia Mansilla
Unravelling the lipoyl-relay of exogenous lipoate utilization in Bacillus subtilis.
Mol Microbiol: 2019, 112(1);302-316
[PubMed:31066113] [WorldCat.org] [DOI] (I p)


POTM 2018


für Master-Seminar

Laura Hobley, Sok Ho Kim, Yukari Maezato, Susan Wyllie, Alan H Fairlamb, Nicola R Stanley-Wall, Anthony J Michael
Norspermidine is not a self-produced trigger for biofilm disassembly.
Cell: 2014, 156(4);844-54
[PubMed:24529384] [WorldCat.org] [DOI] (I p)

Sara A Leiman, Janine M May, Matthew D Lebar, Daniel Kahne, Roberto Kolter, Richard Losick
D-amino acids indirectly inhibit biofilm formation in Bacillus subtilis by interfering with protein synthesis.
J Bacteriol: 2013, 195(23);5391-5
[PubMed:24097941] [WorldCat.org] [DOI] (I p)

Tobias J Erb, Patrick Kiefer, Bodo Hattendorf, Detlef Günther, Julia A Vorholt
GFAJ-1 is an arsenate-resistant, phosphate-dependent organism.
Science: 2012, 337(6093);467-70
[PubMed:22773139] [WorldCat.org] [DOI] (I p)

Felisa Wolfe-Simon, Jodi Switzer Blum, Thomas R Kulp, Gwyneth W Gordon, Shelley E Hoeft, Jennifer Pett-Ridge, John F Stolz, Samuel M Webb, Peter K Weber, Paul C W Davies, Ariel D Anbar, Ronald S Oremland
A bacterium that can grow by using arsenic instead of phosphorus.
Science: 2011, 332(6034);1163-6
[PubMed:21127214] [WorldCat.org] [DOI] (I p)

Ilana Kolodkin-Gal, Diego Romero, Shugeng Cao, Jon Clardy, Roberto Kolter, Richard Losick
D-amino acids trigger biofilm disassembly.
Science: 2010, 328(5978);627-9
[PubMed:20431016] [WorldCat.org] [DOI] (I p)