Difference between revisions of "SpoIVCB"

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(Expression and regulation)
(Genes controlled by SigK)
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=== Genes controlled by SigK ===
 
=== Genes controlled by SigK ===
  
''[[gerE]], [[surC]], [[yabG]], [[yndL]]'', ''[[yitB]]-[[yitA]]-[[yisZ]]''
+
''[[gerE]], [[lipC]], [[surC]], [[yabG]], [[yndL]]'', ''[[yitB]]-[[yitA]]-[[yisZ]]''
  
 
=== Extended information on the protein ===
 
=== Extended information on the protein ===

Revision as of 15:44, 13 April 2009



Gene name spoIVCB
Synonyms cisB, sigK
Essential no
Product RNA polymerase sporulation-specific sigma factor
(sigma-K) (N-terminal half)
Function late mother cell-specific gene expression
MW, pI 17 kDa, 8.208
Gene length, protein length 468 bp, 156 aa
Immediate neighbours nucB, spoIVCA
Gene sequence (+200bp) Protein sequence
Caution: The sequence for this gene in SubtiList contains errors
Genetic context
SpoIVCB context.gif
This image was kindly provided by SubtiList





The gene

Basic information

  • Coordinates:

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Genes controlled by SigK

gerE, lipC, surC, yabG, yndL, yitB-yitA-yisZ

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization:

Database entries

  • Structure:
  • Swiss prot entry:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Operon:
  • Regulation:
  • Regulatory mechanism:
  • Additional information: SigK is activated by processing of pro-SigK by the SpoIVFB metalloprotease

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Arthur Aronson, Purdue University, West Lafayette, USA homepage

Your additional remarks

References

  1. Author1, Author2 & Author3 (year) Title Journal volume: page-page. PubMed