Difference between revisions of "AbrB"

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(Labs working on this gene/protein)
(Labs working on this gene/protein)
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[[Richard Losick]], Harvard Univ., Cambridge, USA [http://www.mcb.harvard.edu/Losick/ homepage]
 
[[Richard Losick]], Harvard Univ., Cambridge, USA [http://www.mcb.harvard.edu/Losick/ homepage]
  
[[Mark Strauch]],
+
[[Mark Strauch]], Baltimore, USA [http://lifesciences.umaryland.edu/Pages/faculty_profile.aspx?ID=212 homepage]
  
 
=Your additional remarks=
 
=Your additional remarks=

Revision as of 11:37, 1 February 2009

  • Description: transition state regulator

Gene name abrB
Synonyms cpsX
Essential
Product transcriptional regulator
Function regulation of transition state genes
MW, pI 10 kDa, 6.57
Gene length, protein length 288 bp, 96 aa
Immediate neighbours
Gene sequence (+200bp) Protein sequence
Genetic context
AbrB context.gif



The gene

Basic information

  • Coordinates:

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s): Abh

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity: interaction with AbbA results in inactivation of AbrB PubMed
  • Localization:

Database entries

  • Structure:
  • Swiss prot entry:
  • KEGG entry:
  • E.C. number:

Additional information

negative regulation of abrB, aprE, ftsAZ, kinC, motA, nprE, pbpE, rbs, spo0H, spoVG, spo0E, tycA, sbo-alb, yqxM-sipW-tasA; positive regulation of comK, hpr


Expression and regulation

  • Operon:
  • Sigma factor:
  • Regulation: expressed at the onset of staionary phase
  • Regulatory mechanism: repressed by Spo0A-P
  • Additional information:

Biological materials

  • Mutant: TT731 (aphA3)
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Richard Losick, Harvard Univ., Cambridge, USA homepage

Mark Strauch, Baltimore, USA homepage

Your additional remarks

References

  1. Banse et al. (2008) Parallel pathways of repression and antirepression governing the transition to stationary phase in Bacillus subtilis.Proc. Natl. Acad. Sci. USA 105: 15547-15552. PubMed
  2. Author1, Author2 & Author3 (year) Title Journal volume: page-page. PubMed