Difference between revisions of "AcoB"
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* '''Regulatory mechanism:''' [[CcpA]]: transcription repression, [[AcoR]]: transcription activation (interaction with [[SigL]]-containing RNA polymerase) [http://www.ncbi.nlm.nih.gov/sites/entrez/11274109 PubMed] | * '''Regulatory mechanism:''' [[CcpA]]: transcription repression, [[AcoR]]: transcription activation (interaction with [[SigL]]-containing RNA polymerase) [http://www.ncbi.nlm.nih.gov/sites/entrez/11274109 PubMed] | ||
| − | * '''Additional information:''' | + | * '''Additional information:''' the mRNA is very stable (half-life > 15 min) [http://www.ncbi.nlm.nih.gov/sites/entrez/12884008 PubMed] |
=Biological materials = | =Biological materials = | ||
Revision as of 06:24, 26 May 2009
- Description: acetoin dehydrogenase E1 component (TPP-dependent beta subunit)
| Gene name | acoB |
| Synonyms | yfjJ |
| Essential | no |
| Product | acetoin dehydrogenase E1 component (TPP-dependent beta subunit) |
| Function | acetoin utilization |
| MW, pI | 36 kDa, 4.396 |
| Gene length, protein length | 1026 bp, 342 aa |
| Immediate neighbours | acoA, acoC |
| Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context 
This image was kindly provided by SubtiList
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Contents
The gene
Basic information
- Coordinates:
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family:
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Interactions:
- Localization: Membrane-proximal (Spotty) PubMed
Database entries
- Structure:
- Swiss prot entry: O34591
- KEGG entry: BSU08070
- E.C. number:
Additional information
Expression and regulation
- Regulatory mechanism: CcpA: transcription repression, AcoR: transcription activation (interaction with SigL-containing RNA polymerase) PubMed
- Additional information: the mRNA is very stable (half-life > 15 min) PubMed
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Michel Debarbouille, Pasteur Institute, Paris, France Homepage
Your additional remarks
References
- Meile et al. (2006) Systematic localisation of proteins fused to the green fluorescent protein in Bacillus subtilis: identification of new proteins at the DNA replication factory Proteomics 6: 2135-2146. PubMed
- Ali, N. O., Bignon, J., Rapoport, G., and Débarbouillé, M. (2001) Regulation of the acetoin catabolic pathway is controlled by sigma L in Bacillus subtilis. J. Bacteriol. 183, 2497-2504. PubMed
- Author1, Author2 & Author3 (year) Title Journal volume: page-page. PubMed
