Difference between revisions of "Cell wall degradation/ turnover"

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{{CategoryTree
 
{{CategoryTree
 
|Parents=
 
|Parents=
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* 1.1.4. [[Capsule biosynthesis and degradation]]
 
* 1.1.4. [[Capsule biosynthesis and degradation]]
 
* 1.1.5. [[Cell wall/ other]]
 
* 1.1.5. [[Cell wall/ other]]
* 1.1.6. [[Cell division]]
+
* 1.1.6. [[Membrane dynamics]]
 +
* 1.1.7. [[Cell division]]
 
|Related=
 
|Related=
none
+
* [[MurR regulon]]
 +
* [[WalR regulon]]
 
|}}
 
|}}
  
 
== Genes in this functional category ==
 
== Genes in this functional category ==
 +
===Endopeptidases===
 +
* ''[[cwlK]]''
 +
*'' [[cwlO]]''
 +
* ''[[cwlS]]''
 +
* ''[[lytE]]''
 +
* ''[[lytF]]''
 +
* ''[[lytH]]''
 +
* ''[[yqgT]]''
 +
 +
===N-acetyl-β-D-glucosaminidases===
 +
* ''[[lytD]]''
 +
* ''[[lytG]]''
  
 
=== Autolysis ===  
 
=== Autolysis ===  
* [[blyA]]
+
* ''[[blyA]]''
* [[cwlA]]
+
* ''[[cwlA]]''
* [[cwlH]]
+
*'' [[cwlH]]''
* [[cwlK]]
+
*'' [[cwlP]]''
* [[cwlO]]
+
* ''[[cwlQ]]''
* [[cwlP]]
+
* ''[[cwlT]]''
* [[cwlQ]]
+
* ''[[iseA]]''
* [[cwlS]]
+
* ''[[lytA]]''
* [[cwlT]]
+
* ''[[lytB]]''
* [[iseA]]
+
* ''[[lytC]]''
* [[lytA]]
+
* ''[[pbpE]]''
* [[lytB]]
+
* ''[[xepA]]''
* [[lytC]]
+
*'' [[xlyA]]''
* [[lytD]]
+
* ''[[xlyB]]''
* [[lytE]]
+
*'' [[yocH]]''
* [[lytF]]
+
* ''[[ysbB]]''
* [[lytG]]
 
* [[lytR]]
 
* [[lytS]]
 
* [[lytT]]
 
* [[pbpE]]
 
* [[xepA]]
 
* [[xlyA]]
 
* [[xlyB]]
 
* [[yocH]]
 
* [[ysbB]]
 
  
 
=== Autolysis/ based on similarity ===  
 
=== Autolysis/ based on similarity ===  
* [[ykvT]]
+
* ''[[ykvT]]''
* [[ytkC]]
+
* ''[[ytkC]]''
 +
 
 +
=== Degradation of wall teichoic acids ===
 +
* ''[[glpQ]]''
 +
* ''[[phoD]]''
  
 
=== Utilization of cell wall components ===  
 
=== Utilization of cell wall components ===  
* [[amiE]]
+
* ''[[amiE]]''
* [[gamA]]
+
* ''[[gamA]]''
* [[gamP]]
+
* ''[[gamP]]''
* [[murP]]
+
* ''[[murP]]''
* [[murQ]]
+
* ''[[murQ]]''
* [[murR]]
+
* ''[[murR]]''
* [[nagA]]
+
*'' [[nagA]]''
* [[nagB]]
+
* ''[[nagB]]''
* [[nagZ]]
+
*'' [[nagZ]]''
* [[ybgA]]
+
* ''[[gamR]]''
 +
 
 +
=== Additional genes===
 +
* ''[[yqiI]]''
 +
 
 +
==Important Original Publications==
 +
<pubmed>23600697, 23746506</pubmed>
 +
 
 +
==Important Reviews==
 +
<pubmed> 19019149 18792692 10708363 17468031 18266855 21796380 24035761 22944244 </pubmed>
 +
 
 +
=Back to [[categories]]=

Latest revision as of 09:13, 27 October 2016

Parent categories
Neighbouring categories
Related categories

Genes in this functional category

Endopeptidases

N-acetyl-β-D-glucosaminidases

Autolysis

Autolysis/ based on similarity

Degradation of wall teichoic acids

Utilization of cell wall components

Additional genes

Important Original Publications

Gaurav Misra, Enrique R Rojas, Ajay Gopinathan, Kerwyn Casey Huang
Mechanical consequences of cell-wall turnover in the elongation of a Gram-positive bacterium.
Biophys J: 2013, 104(11);2342-52
[PubMed:23746506] [WorldCat.org] [DOI] (I p)

Morgan Beeby, James C Gumbart, Benoît Roux, Grant J Jensen
Architecture and assembly of the Gram-positive cell wall.
Mol Microbiol: 2013, 88(4);664-72
[PubMed:23600697] [WorldCat.org] [DOI] (I p)


Important Reviews

Timothy K Lee, Kerwyn Casey Huang
The role of hydrolases in bacterial cell-wall growth.
Curr Opin Microbiol: 2013, 16(6);760-6
[PubMed:24035761] [WorldCat.org] [DOI] (I p)

Timna J Wyckoff, Jennifer A Taylor, Nina R Salama
Beyond growth: novel functions for bacterial cell wall hydrolases.
Trends Microbiol: 2012, 20(11);540-7
[PubMed:22944244] [WorldCat.org] [DOI] (I p)

Jan Reith, Christoph Mayer
Peptidoglycan turnover and recycling in Gram-positive bacteria.
Appl Microbiol Biotechnol: 2011, 92(1);1-11
[PubMed:21796380] [WorldCat.org] [DOI] (I p)

Sarah Dubrac, Paola Bisicchia, Kevin M Devine, Tarek Msadek
A matter of life and death: cell wall homeostasis and the WalKR (YycGF) essential signal transduction pathway.
Mol Microbiol: 2008, 70(6);1307-22
[PubMed:19019149] [WorldCat.org] [DOI] (I p)

Sarah Dubrac, Tarek Msadek
Tearing down the wall: peptidoglycan metabolism and the WalK/WalR (YycG/YycF) essential two-component system.
Adv Exp Med Biol: 2008, 631;214-28
[PubMed:18792692] [WorldCat.org] [DOI] (P p)

Waldemar Vollmer, Bernard Joris, Paulette Charlier, Simon Foster
Bacterial peptidoglycan (murein) hydrolases.
FEMS Microbiol Rev: 2008, 32(2);259-86
[PubMed:18266855] [WorldCat.org] [DOI] (P p)

Edie Scheurwater, Chris W Reid, Anthony J Clarke
Lytic transglycosylases: bacterial space-making autolysins.
Int J Biochem Cell Biol: 2008, 40(4);586-91
[PubMed:17468031] [WorldCat.org] [DOI] (P p)

Thomas J Smith, Steve A Blackman, Simon J Foster
Autolysins of Bacillus subtilis: multiple enzymes with multiple functions.
Microbiology (Reading): 2000, 146 ( Pt 2);249-262
[PubMed:10708363] [WorldCat.org] [DOI] (P p)


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