Difference between revisions of "YonT"

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|style="background:#ABCDEF;" align="center"| '''Gene length, protein length''' || 174 bp, 58 aa  
 
|style="background:#ABCDEF;" align="center"| '''Gene length, protein length''' || 174 bp, 58 aa  
 
|-
 
|-
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yonU]]'', ''[[yonS]]''
+
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yoyJ]]'', ''[[yonS]]''
 
|-
 
|-
 
|colspan="2" style="background:#FAF8CC;" align="center"|'''Get the DNA and protein [http://srs.ebi.ac.uk/srsbin/cgi-bin/wgetz?-e+&#91;EMBLCDS:CAB14018&#93;+-newId sequences] <br/> (Barbe ''et al.'', 2009)'''
 
|colspan="2" style="background:#FAF8CC;" align="center"|'''Get the DNA and protein [http://srs.ebi.ac.uk/srsbin/cgi-bin/wgetz?-e+&#91;EMBLCDS:CAB14018&#93;+-newId sequences] <br/> (Barbe ''et al.'', 2009)'''

Revision as of 12:31, 3 December 2012

  • Description: toxin

Gene name yonT
Synonyms
Essential no
Product toxin
Function unknown
Gene expression levels in SubtiExpress: yonT
MW, pI 6 kDa, 12.857
Gene length, protein length 174 bp, 58 aa
Immediate neighbours yoyJ, yonS
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YonT context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YonT expression.png
























Categories containing this gene/protein

toxins, antitoxins and immunity against toxins, SP-beta prophage

This gene is a member of the following regulons

The gene

Basic information

  • Locus tag: BSU21000

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: panD family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization:

Database entries

  • Structure:
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Operon:
  • Sigma factor:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:
    • next to txpA, the yonT mRNA has the strongest Shine-Dalgarno region in B. subtilis PubMed

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References