Difference between revisions of "GerT"
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|style="background:#ABCDEF;" align="center"| '''Gene length, protein length''' || 471 bp, 157 aa | |style="background:#ABCDEF;" align="center"| '''Gene length, protein length''' || 471 bp, 157 aa | ||
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| − | |style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yojE]]'', ''[[ | + | |style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yojE]]'', ''[[yojB]]'' |
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|colspan="2" style="background:#FAF8CC;" align="center"|'''Get the DNA and protein [http://srs.ebi.ac.uk/srsbin/cgi-bin/wgetz?-e+[EMBLCDS:CAE01457]+-newId sequences] <br/> (Barbe ''et al.'', 2009)''' | |colspan="2" style="background:#FAF8CC;" align="center"|'''Get the DNA and protein [http://srs.ebi.ac.uk/srsbin/cgi-bin/wgetz?-e+[EMBLCDS:CAE01457]+-newId sequences] <br/> (Barbe ''et al.'', 2009)''' | ||
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* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=gerT_2124021_2124494_1 gerT] {{PubMed|22383849}} | * '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=gerT_2124021_2124494_1 gerT] {{PubMed|22383849}} | ||
| − | * '''Sigma factor:''' [[SigK]] {{PubMed|17720779}} | + | * '''[[Sigma factor]]:''' [[SigK]] {{PubMed|17720779}} |
* '''Regulation:''' | * '''Regulation:''' | ||
Revision as of 19:44, 12 January 2013
- Description: spore coat protein, involved in germination
| Gene name | gerT |
| Synonyms | yozR |
| Essential | no |
| Product | spore coat protein |
| Function | germination |
| Gene expression levels in SubtiExpress: gerT | |
| MW, pI | 18 kDa, 6.342 |
| Gene length, protein length | 471 bp, 157 aa |
| Immediate neighbours | yojE, yojB |
| Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context 
This image was kindly provided by SubtiList
| |
Expression at a glance PubMed
| |
Contents
Categories containing this gene/protein
sporulation proteins, germination, membrane proteins
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU19490
Phenotypes of a mutant
- mutants respond poorly to multiple germinants, impaired in early stage of germination PubMed
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family: eamA transporter family (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
Database entries
- Structure:
- UniProt: Q7WY67
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Operon: gerT (according to DBTBS)
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Caitlin C Ferguson, Amy H Camp, Richard Losick
gerT, a newly discovered germination gene under the control of the sporulation transcription factor sigmaK in Bacillus subtilis.
J Bacteriol: 2007, 189(21);7681-9
[PubMed:17720779]
[WorldCat.org]
[DOI]
(P p)
