YbcM

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  • Description: similar to glucosamine-fructose-6-phosphate aminotransferase

Gene name ybcM
Synonyms
Essential no
Product unknown
Function unknown
Gene expression levels in SubtiExpress: ybcM
MW, pI 11 kDa, 4.787
Gene length, protein length 312 bp, 104 aa
Immediate neighbours ybcL, skfA
Sequences Protein DNA DNA_with_flanks
Genetic context
YbcM context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YbcM expression.png















Categories containing this gene/protein

utilization of specific carbon sources, membrane proteins, prophage 1

This gene is a member of the following regulons

The gene

Basic information

  • Locus tag: BSU01900

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Operon:
  • Regulation: induced by rhamnogalacturonan PubMed
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Akihito Ochiai, Takafumi Itoh, Akiko Kawamata, Wataru Hashimoto, Kousaku Murata
Plant cell wall degradation by saprophytic Bacillus subtilis strains: gene clusters responsible for rhamnogalacturonan depolymerization.
Appl Environ Microbiol: 2007, 73(12);3803-13
[PubMed:17449691] [WorldCat.org] [DOI] (P p)