Difference between revisions of "RpsP"

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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[ffh]]'', ''[[ylqC]]''
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[ffh]]'', ''[[ylqC]]''
 
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU15990 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU15990 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU15990 Advanced_DNA]
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU15990 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU15990 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU15990 DNA_with_flanks]
 
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|colspan="2" | '''Genetic context''' <br/> [[Image:rpsP_context.gif]]
 
|colspan="2" | '''Genetic context''' <br/> [[Image:rpsP_context.gif]]

Revision as of 10:12, 14 May 2013

Gene name rpsP
Synonyms
Essential yes PubMed
Product ribosomal protein S16 (BS17)
Function translation
Gene expression levels in SubtiExpress: rpsP
Interactions involving this protein in SubtInteract: RpsP
MW, pI 9 kDa, 10.659
Gene length, protein length 270 bp, 90 aa
Immediate neighbours ffh, ylqC
Sequences Protein DNA DNA_with_flanks
Genetic context
RpsP context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
500px















Categories containing this gene/protein

translation, essential genes

This gene is a member of the following regulons

stringent response

The gene

Basic information

  • Locus tag: BSU15990

Phenotypes of a mutant

essential PubMed

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Sigma factor:
  • Regulation:
    • RelA dependent downregulation (Class I) during stringent response PubMed
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Additional publications: PubMed

Matthew A Lauber, William E Running, James P Reilly
B. subtilis ribosomal proteins: structural homology and post-translational modifications.
J Proteome Res: 2009, 8(9);4193-206
[PubMed:19653700] [WorldCat.org] [DOI] (P p)

K Honda, K Nakamura, M Nishiguchi, K Yamane
Cloning and characterization of a Bacillus subtilis gene encoding a homolog of the 54-kilodalton subunit of mammalian signal recognition particle and Escherichia coli Ffh.
J Bacteriol: 1993, 175(15);4885-94
[PubMed:8335643] [WorldCat.org] [DOI] (P p)