Difference between revisions of "SprA"

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m (Jstuelk moved page YokA to SprA: 25299644)
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|style="background:#ABCDEF;" align="center"|'''Function''' || excision of prophage SPβ
 
|style="background:#ABCDEF;" align="center"|'''Function''' || excision of prophage SPβ
 
|-
 
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|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU21660 yokA]
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|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU21660 sprA]
 
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|-
 
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 62 kDa, 8.946   
 
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 62 kDa, 8.946   
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* '''Operon:'''  
 
* '''Operon:'''  
  
* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=yokA_2284771_2286408_1 yokA] {{PubMed|22383849}}
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* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=yokA_2284771_2286408_1 sprA] {{PubMed|22383849}}
  
 
* '''[[Sigma factor]]:'''  
 
* '''[[Sigma factor]]:'''  

Revision as of 08:16, 10 October 2014

  • Description: DNA recombinase, SPβ site-specific recombination factor A

Gene name yokA
Synonyms
Essential no
Product SPβ site-specific recombination factor A
Function excision of prophage SPβ
Gene expression levels in SubtiExpress: sprA
MW, pI 62 kDa, 8.946
Gene length, protein length 1635 bp, 545 aa
Immediate neighbours yokB, ypqP
Sequences Protein DNA DNA_with_flanks
Genetic context
YokA context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YokA expression.png















Categories containing this gene/protein

DNA repair/ recombination, SP-beta prophage

This gene is a member of the following regulons

The gene

Basic information

  • Locus tag: BSU21660

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Operon:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:
    • number of protein molecules per cell (minimal medium with glucose and ammonium): 154 PubMed

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References