Difference between revisions of "YrdD/3"

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|style="background:#ABCDEF;" align="center"|'''Function''' || unknown
 
|style="background:#ABCDEF;" align="center"|'''Function''' || unknown
 
|-
 
|-
|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://cellpublisher.gobics.de/subtiexpress/ ''Subti''Express]''': [http://cellpublisher.gobics.de/subtiexpress/bsu/BSU26750 yrdD/3]
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|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU26750 yrdD/3]
 
|-
 
|-
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 5 kDa, 10.21  
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|style="background:#ABCDEF;" align="center"| '''MW, pI''' || -, -  
 
|-
 
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|style="background:#ABCDEF;" align="center"| '''Gene length, protein length''' || 147 bp, 49 aa
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|style="background:#ABCDEF;" align="center"| '''Gene length, protein length''' || 135 bp, -
 
|-
 
|-
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yrdD/2]]'', ''[[yrdC]]''
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yrdD/2]]'', ''[[yrdC]]''
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  <div align="right"> <small>This image was kindly provided by [http://genolist.pasteur.fr/SubtiList/ SubtiList]</small></div>
 
  <div align="right"> <small>This image was kindly provided by [http://genolist.pasteur.fr/SubtiList/ SubtiList]</small></div>
 
|-
 
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|colspan="2" |'''[http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=yrdD_2732747_2732881_-1 Expression at a glance]'''&#160;&#160;&#160;{{PubMed|22383849}}<br/>[[Image:yrdD/3_expression.png|500px]]
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|colspan="2" |'''[http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=yrdD_2732747_2732881_-1 Expression at a glance]'''&#160;&#160;&#160;{{PubMed|22383849}}<br/>[[Image:yrdD/3_expression.png|500px|link=http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU26750]]
 
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|-
 
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=== Database entries ===
 
=== Database entries ===
 +
* '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU26750&redirect=T BSU26750]
  
 
* '''DBTBS entry:''' no entry
 
* '''DBTBS entry:''' no entry
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=== Database entries ===
 
=== Database entries ===
 +
* '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU26750&redirect=T BSU26750]
  
 
* '''Structure:'''
 
* '''Structure:'''

Latest revision as of 14:19, 2 April 2014

  • Description: part of the yrdD pseudogene

Gene name yrdD
Synonyms
Essential no
Product unknown
Function unknown
Gene expression levels in SubtiExpress: yrdD/3
MW, pI -, -
Gene length, protein length 135 bp, -
Immediate neighbours yrdD/2, yrdC
Gene sequence (+200bp) Protein sequence
Genetic context
YrdD context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
500px
























Categories containing this gene/protein

pseudogenes

This gene is a member of the following regulons

The gene

Basic information

  • Locus tag: BSU26750

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Operon:
  • Sigma factor:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References