Difference between revisions of "YorK"
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* '''Effectors of protein activity:''' | * '''Effectors of protein activity:''' | ||
| − | * '''Interactions:''' | + | * '''[[SubtInteract|Interactions]]:''' |
| − | * '''Localization:''' | + | * '''[[Localization]]:''' |
=== Database entries === | === Database entries === | ||
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* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=yorK_2179526_2181256_-1 yorK] {{PubMed|22383849}} | * '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=yorK_2179526_2181256_-1 yorK] {{PubMed|22383849}} | ||
| − | * '''Sigma factor:''' | + | * '''[[Sigma factor]]:''' |
* '''Regulation:''' | * '''Regulation:''' | ||
Revision as of 19:46, 26 March 2013
- Description: single-strand DNA-specific exonuclease
| Gene name | yorK |
| Synonyms | |
| Essential | no |
| Product | single-strand DNA-specific exonuclease |
| Function | unknown |
| Gene expression levels in SubtiExpress: yorK | |
| Interactions involving this protein in SubtInteract: YorK | |
| MW, pI | 65 kDa, 6.562 |
| Gene length, protein length | 1728 bp, 576 aa |
| Immediate neighbours | yorL, yorJ |
| Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context 
This image was kindly provided by SubtiList
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Expression at a glance PubMed
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Contents
Categories containing this gene/protein
DNA repair/ recombination, SP-beta prophage, phosphoproteins
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU20350
Phenotypes of a mutant
Database entries
- DBTBS entry: no entry
- SubtiList entry: [1]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family: RecJ family
- Paralogous protein(s): YrvE
Extended information on the protein
- Kinetic information:
- Domains:
- Modification: phosphorylation on Tyr-473 PubMed
- Cofactor(s):
- Effectors of protein activity:
Database entries
- Structure:
- UniProt: O31903
- KEGG entry: [2]
- E.C. number:
Additional information
Expression and regulation
- Operon:
- Regulation:
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
