Difference between revisions of "Stusti 2018"

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== Die Sprache der RNA: Von RNA-Schaltern zu CRISPR/ Cas ==
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= Die Sprache der RNA: Von RNA-Schaltern zu CRISPR/ Cas =
  
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* Riboswitches
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==  What makes RNA such a special molecule – specific chemical and structural features of RNA: Niklas Kehl ==
−
<pubmed>   27607554    28121427      28206750  28375729    28396576    28541183    28455443
+
<pubmed> 21930584</pubmed>
  
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    29537923      27798597
+
== RNA synthesis – DNA and RNA dependent RNA polymerases and primase during transcription, replication and repair: Andrea Lehner ==
 +
<pubmed>  24219496 8156586 28979293 26109351</pubmed>
  
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    29135333 29420816  28611182</pubmed>
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== Ribozymes (catalytically active RNAs: Christian Thielscher) ==
 +
<pubmed> 21930582 22454536 14730013 10554775 21930585 6297745</pubmed>
  
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* Riboregulation and virulence
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== The Ribosome - the role and function of ribosomal RNAs and the central dogma of molecular biology: Matthias Lenz ==
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<pubmed>27651123  27672192  28434876  28529506 28886688</pubmed>  
+
<pubmed> 18292779 21930591 25500179</pubmed>
  
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* RNA-based second messengers
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== The Splicosome - the mechanism of mRNA splicing – alternative gene expression, genome size definition and phenotype plasticity: Christian Schneider ==
−
<pubmed>28420751</pubmed>  
+
<pubmed> 24452469,26682498 25798239 </pubmed>
  
−
* Ribozymes
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== Riboregulation and virulence, targeting by antibiotics: Theresia Eisele ==
−
<pubmed>27130889</pubmed>
+
<pubmed>27651123      26416753
 +
  27120414   27672192  28434876  28529506 28886688</pubmed> 
 +
 
 +
== Riboswitch modeling: Mark Sinzger ==
 +
<pubmed>19381267 28591515 27378291</pubmed>
 +
 
 +
 +
== The RNA world and evolution: Roman Doll ==
 +
<pubmed>      25109990 25385129    25734234 25739364    26439358 17540026 29031737      28657884  19117371</pubmed>
 +
 
 +
== RNA modification: Jan Michel Göring ==
 +
<pubmed>      26189113    26832457  27375676
 +
    28264529 28624569</pubmed>
 +
 
 +
== RNA degradation/processing: Lena Kricsfalussy-Hrabar ==
 +
<pubmed>      26096689  28202538    19239894 </pubmed>
 +
 
 +
== Regulation by non-coding RNA: Maxin Drömer ==
 +
<pubmed>        18981470      24667238 </pubmed>
 +
 
 +
== RNA dependent DNA Polymerases - from telomerase to retroviruses: Ansgar Stenzel==
 +
<pubmed>      18972389 26830230     28141967 </pubmed>
 +
 
 +
== CRISPR/Cas: Science – the bacterial “immune” system: Maximilian Schreier ==
 +
<pubmed>      29358495      29169146 28375731</pubmed>
 +
 
 +
== CRISPR/Cas: Application and groundbreaking  perspectives: Johann Liebeton ==
 +
<pubmed>    26771484 </pubmed>
 +
 
 +
== Synthesis, maturation and function of tRNAs – The wobble hypothesis and specific codon usage as a molecular barrier for horizontal gene transfer: Artur Fornol ==
 +
<pubmed>    22016848 26186290 21957054 23166520 21930591</pubmed>
 +
 
 +
== Outlook: Finding function in mystery transcripts – eRNAs, long-non coding (lncRNA) and circular RNA (circRNA) ==
 +
<pubmed>      28533025 25561718 26883671 28485684 29182528 21925379</pubmed>
 +
 
 +
== Outlook: RNA and SELEX – new prospects and applications for targeted interference with regulatory pathways ==
 +
<pubmed>  17627883 19943183  </pubmed>
 +
 
 +
== RNA-based second messengers: Jörg Stülke ==
 +
<pubmed> 28420751    25616065 25682701    25869574 26280533</pubmed>
 +
 
 +
== Riboswitches: Jörg Stülke ==
 +
<pubmed>    27607554      26655897   28121427      29618088 25794618    25794617 25848023    24769284 25571850   25964329 25959893        24816551 25583497  26118534 26494285 28206750  28375729    28396576    28541183    28455443   29537923      27798597 29135333  29420816  28611182</pubmed>
 +
 
 +
== RNA dependent RNA Polymerases – the RNA replicase ==
 +
<pubmed>          29439438     18268843 9878607 </pubmed>
 +
 
 +
== The mysterious function and role of 6S-RNA and pRNA in bacteria ==
 +
<pubmed>    24786589  17383220 24742053 23457253</pubmed>
 +
 
 +
== RNA thermometers==
 +
<pubmed>25477380 27060146 </pubmed>

Latest revision as of 13:42, 27 July 2018

Contents

Die Sprache der RNA: Von RNA-Schaltern zu CRISPR/ Cas

What makes RNA such a special molecule – specific chemical and structural features of RNA: Niklas Kehl


RNA synthesis – DNA and RNA dependent RNA polymerases and primase during transcription, replication and repair: Andrea Lehner


Ribozymes (catalytically active RNAs: Christian Thielscher)


The Ribosome - the role and function of ribosomal RNAs and the central dogma of molecular biology: Matthias Lenz


The Splicosome - the mechanism of mRNA splicing – alternative gene expression, genome size definition and phenotype plasticity: Christian Schneider

Panagiotis Papasaikas, Juan Valcárcel
The Spliceosome: The Ultimate RNA Chaperone and Sculptor.
Trends Biochem Sci: 2016, 41(1);33-45
[PubMed:26682498] [WorldCat.org] [DOI] (I p)

Yan Wang, Jing Liu, B O Huang, Yan-Mei Xu, Jing Li, Lin-Feng Huang, Jin Lin, Jing Zhang, Qing-Hua Min, Wei-Ming Yang, Xiao-Zhong Wang
Mechanism of alternative splicing and its regulation.
Biomed Rep: 2015, 3(2);152-158
[PubMed:25798239] [WorldCat.org] [DOI] (P p)

A Gregory Matera, Zefeng Wang
A day in the life of the spliceosome.
Nat Rev Mol Cell Biol: 2014, 15(2);108-21
[PubMed:24452469] [WorldCat.org] [DOI] (I p)


Riboregulation and virulence, targeting by antibiotics: Theresia Eisele


Riboswitch modeling: Mark Sinzger


The RNA world and evolution: Roman Doll


RNA modification: Jan Michel Göring


RNA degradation/processing: Lena Kricsfalussy-Hrabar

John C Zinder, Christopher D Lima
Targeting RNA for processing or destruction by the eukaryotic RNA exosome and its cofactors.
Genes Dev: 2017, 31(2);88-100
[PubMed:28202538] [WorldCat.org] [DOI] (I p)

Soraya Aït-Bara, Agamemnon J Carpousis
RNA degradosomes in bacteria and chloroplasts: classification, distribution and evolution of RNase E homologs.
Mol Microbiol: 2015, 97(6);1021-135
[PubMed:26096689] [WorldCat.org] [DOI] (I p)

Jonathan Houseley, David Tollervey
The many pathways of RNA degradation.
Cell: 2009, 136(4);763-76
[PubMed:19239894] [WorldCat.org] [DOI] (I p)


Regulation by non-coding RNA: Maxin Drömer


RNA dependent DNA Polymerases - from telomerase to retroviruses: Ansgar Stenzel


CRISPR/Cas: Science – the bacterial “immune” system: Maximilian Schreier


CRISPR/Cas: Application and groundbreaking perspectives: Johann Liebeton


Synthesis, maturation and function of tRNAs – The wobble hypothesis and specific codon usage as a molecular barrier for horizontal gene transfer: Artur Fornol


Outlook: Finding function in mystery transcripts – eRNAs, long-non coding (lncRNA) and circular RNA (circRNA)


Outlook: RNA and SELEX – new prospects and applications for targeted interference with regulatory pathways


RNA-based second messengers: Jörg Stülke


Riboswitches: Jörg Stülke


RNA dependent RNA Polymerases – the RNA replicase


The mysterious function and role of 6S-RNA and pRNA in bacteria


RNA thermometers

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