Difference between revisions of "YdhU/1"
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* '''Operon:''' ''ydhU'' {{PubMed|12354229}} | * '''Operon:''' ''ydhU'' {{PubMed|12354229}} | ||
| − | * '''[ | + | * '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=ydhU_633923_634651_-1 ydhU/1] {{PubMed|22383849}} |
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| + | * '''Sigma factor:''' | ||
* '''Regulation:''' induced by iron starvation ([[Fur]]) {{PubMed|12354229}} | * '''Regulation:''' induced by iron starvation ([[Fur]]) {{PubMed|12354229}} | ||
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* '''Regulatory mechanism:''' Fur: transcription repression {{PubMed|12354229}} | * '''Regulatory mechanism:''' Fur: transcription repression {{PubMed|12354229}} | ||
| − | * '''Additional information:''' | + | * '''Additional information:''' |
=Biological materials = | =Biological materials = | ||
Revision as of 15:15, 12 April 2012
- Description: similar to Mn catalase, inactive pseudogene in strain 168
| Gene name | ydhU/1 |
| Synonyms | ydhU |
| Essential | no |
| Product | unknown |
| Function | unknown |
| MW, pI | - , - |
| Gene length, protein length | 729 bp, - |
| Immediate neighbours | gmuG, ydhU/2 |
| Gene sequence (+200bp) | Protein sequence |
Genetic context
This image was kindly provided by SubtiList
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Contents
Categories containing this gene/protein
resistance against oxidative and electrophile stress, pseudogenes
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU05890
Phenotypes of a mutant
thsi is a pseudogene in B. subtilis 168
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family: manganese catalase family (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
Database entries
- Structure:
- Swiss prot entry: O05513
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Operon: ydhU PubMed
- Sigma factor:
- Regulatory mechanism: Fur: transcription repression PubMed
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
