Difference between revisions of "MutY"
| Line 23: | Line 23: | ||
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yfhP]]'', ''[[yfhS]]''  | |style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yfhP]]'', ''[[yfhS]]''  | ||
|-  | |-  | ||
| − | |style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU08630 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU08630 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU08630   | + | |style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU08630 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU08630 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU08630 DNA_with_flanks]  | 
|-  | |-  | ||
|colspan="2" | '''Genetic context''' <br/> [[Image:yfhQ_context.gif]]  | |colspan="2" | '''Genetic context''' <br/> [[Image:yfhQ_context.gif]]  | ||
Revision as of 09:45, 14 May 2013
-  Description: A/G-specific adenine glycosylase, error prevention oxidized guanine system, releases adenines from 8-oxo-G:A mismatches 
 
| Gene name | mutY | 
| Synonyms | yfhQ | 
| Essential | no | 
| Product | A/G-specific adenine glycosylase | 
| Function | DNA repair | 
| Gene expression levels in SubtiExpress: mutY | |
|  Metabolic function and regulation of this protein in SubtiPathways:  Lipid synthesis  | |
| MW, pI | 41 kDa, 6.044 | 
| Gene length, protein length | 1107 bp, 369 aa | 
| Immediate neighbours | yfhP, yfhS | 
| Sequences | Protein DNA DNA_with_flanks | 
 Genetic context  
  This image was kindly provided by SubtiList 
 | |
Expression at a glance   PubMed 
 | |
Contents
Categories containing this gene/protein
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU08630
 
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
 
- SubtiList entry: [2]
 
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity: releases adenines from 8-oxo-G:A mismatches
 
- Protein family:
 
- Paralogous protein(s):
 
Extended information on the protein
- Kinetic information:
 
- Domains:
 
- Modification:
 
- Cofactor(s):
 
- Effectors of protein activity:
 
Database entries
- Structure: 1RRS (complex with DNA, Geobacillus stearothermophilus)
 
- UniProt: O31584
 
- KEGG entry: [3]
 
- E.C. number:
 
Additional information
Expression and regulation
- Regulation:
 
- Regulatory mechanism:
 
- Additional information:
 
Biological materials
- Mutant:
 
- Expression vector:
 
- lacZ fusion:
 
- GFP fusion:
 
- two-hybrid system:
 
- Antibody:
 
Labs working on this gene/protein
Your additional remarks
References
Luz E Vidales, Lluvia C Cárdenas, Eduardo Robleto, Ronald E Yasbin, Mario Pedraza-Reyes  
Defects in the error prevention oxidized guanine system potentiate stationary-phase mutagenesis in Bacillus subtilis. 
J Bacteriol: 2009, 191(2);506-13 
[PubMed:19011023]
  [WorldCat.org]
 [DOI]
 (I p)
Hiroki Yamamoto, Masao Mori, Junichi Sekiguchi  
Transcription of genes near the sspE locus of the Bacillus subtilis genome. 
Microbiology (Reading): 1999, 145 ( Pt 8);2171-2180 
[PubMed:10463184]
  [WorldCat.org]
 [DOI]
 (P p)
Additional publications: PubMed

