ysmB

ysmB
168

similar to transcriptional regulator (MarR family)

locus
BSU_28400
Molecular weight
17.00 kDa
pI
6.51
Protein length
146 aaSequenceBlast
Gene length
441 bpSequenceBlast
function
unknown
product
unknown
essential
no
ec
null
synonyms
ysmB
Outlinks
BsubCyc SubtiList UniProt STRING Genoscapist PaperBLAST

Genomic Context

Categories containing this gene/protein

List of homologs in different organisms, belongs to COG1846 (Galperin et al., 2021)

This gene is a member of the following regulons

Gene
Coordinates
2,904,043 → 2,904,483
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The protein
[wiki|Domains]
[wiki|HTH marR-type domain] (aa 9-141) (according to UniProt)
Structure
[PDB|2RDP] (Geobacillus stearothermophilus)
[AF|P97247]
Expression and Regulation
Operons
genes
[gene|FBD63332ABDEA7D4837396A0617DA51153781CFE|ysmB]-[gene|36FF9F097682D8BA8D7359BFEAF71ACE8E9E90D8|racE]
description
[Pubmed|22383849]
Open in new tab

[gene|FBD63332ABDEA7D4837396A0617DA51153781CFE|ysmB]→[gene|36FF9F097682D8BA8D7359BFEAF71ACE8E9E90D8|racE]

2024-04-06 22:37:51

ghost

61

f5e4f8ee31f04301223ca86fefb4a0124b1353e1

ECD5050BEE6E10F29E2E5EB1C377C6316A85AAA0

Biological materials
Mutant
MGNA-B016 (ysmB::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1015 NBRP B. subtilis, Japan]
BKE28400 (Δ[gene|FBD63332ABDEA7D4837396A0617DA51153781CFE|ysmB]::erm  trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKE28400 BGSC],  [Pubmed|28189581], upstream reverse: _UP1_CATTTGTCCATCCCTCACTC,  downstream forward: _UP4_GAAATGAAGAGAAAATGAGG
BKK28400 (Δ[gene|FBD63332ABDEA7D4837396A0617DA51153781CFE|ysmB]::kan  trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKK28400 BGSC],  [Pubmed|28189581], upstream reverse: _UP1_CATTTGTCCATCCCTCACTC,  downstream forward: _UP4_GAAATGAAGAGAAAATGAGG
References
22383849

FBD63332ABDEA7D4837396A0617DA51153781CFE

Page visits: 1744

Time of last update: 2024-04-19 04:39:43

Author of last update: Melvin.boenninger