Category: Prophage 1

[category|SW.5|5. Prophages and mobile genetic elements]

[category|SW.5.1|5.1. Prophages]

[category|SW.5.1.4|5.1.4. Prophage 1]

Name	Function
[gene\|0F8A564256A598DB3A36668FA0C984542FE1323F\|adaA]	adaptive response to alkylative DNA damage
[gene\|D7E4E4A95CFDB3CFCC7432B08653644AF6876CA1\|adaB]	adaptive response to alkylative DNA damage
[gene\|297DF91EF3E91A6D2DC39BBC7FE8711AB7EBE509\|alkA]	adaptive response to alkylative DNA damage
[gene\|CCDDC414E266D86B9027EA67EA565D87357023B3\|ndhF]	uptake of bicarbonate
[gene\|DDB0022F50999AC52809D651C9CC5A5FDC71302C\|skfA]	killing of sister cells
[gene\|F981C605C652D1A4429579A5F24608CE7F570834\|skfB]	maturation of [protein\|DDB0022F50999AC52809D651C9CC5A5FDC71302C\|spore killing factor]
[gene\|4DFF9924E07D834F37580D73E88451C1671C5111\|skfC]	may be involved in spore killing
[gene\|5886364199844356446C08F08664B301A714E74A\|skfE]	export of the spore killing factor [protein\|DDB0022F50999AC52809D651C9CC5A5FDC71302C\|skfA]
[gene\|77D93CAEF46EBBB9BAF570714445E194D5F2884E\|skfF]	export of the spore killing factor [protein\|DDB0022F50999AC52809D651C9CC5A5FDC71302C\|skfA]
[gene\|527AB8EAAF0A1AAD4E5B714B35ED9F78BECC17EC\|skfG]	unknown
[gene\|F31B12F80AFC3580FD33811A1C22E74F75DC1A85\|skfH]	unknown
[gene\|E04C67FB0EA3FFEC8FB68440F4661505C3DFDA29\|ybcC]	uptake of bicarbonate
[gene\|5D96DF2F32050BBCEC3811843398FE84DE88F6DF\|ybcF]	unknown
[gene\|EBE0360D89E50EEBB84CC853C6E4B4053DBF8925\|ybcH]	unknown
[gene\|6E063903E9E3B770CAACA9DF98DFA540FAE6FD3D\|ybcI]	unknown
[gene\|C8070C5525BB0763161EDC2127757BAE6C937823\|ybcL]	unknown
[gene\|47E3AEE400EC9505C7C7DB07BF172E4FA957F708\|ybcM]	unknown
[gene\|C26EAFC9DC4A930F1887E0B99770F5F386A407D3\|ybzH]	unknown

important note

A strain devoid of [wiki|PBSX prophage] , [wiki|SP-beta prophage] and the [wiki|Skin element] (TF8A) as well as a strain devoid of all six prophages of the 168 genome (D6) is available in Jan Maarten van Dijl's lab [PubMed|12949151]

references

12949151

Page visits: 642

Time of last update: 2025-05-30 10:32:14

Author of last update: ghost

Name	Function
[gene\|0F8A564256A598DB3A36668FA0C984542FE1323F\|adaA]	adaptive response to alkylative DNA damage
[gene\|D7E4E4A95CFDB3CFCC7432B08653644AF6876CA1\|adaB]	adaptive response to alkylative DNA damage
[gene\|297DF91EF3E91A6D2DC39BBC7FE8711AB7EBE509\|alkA]	adaptive response to alkylative DNA damage
[gene\|CCDDC414E266D86B9027EA67EA565D87357023B3\|ndhF]	uptake of bicarbonate
[gene\|DDB0022F50999AC52809D651C9CC5A5FDC71302C\|skfA]	killing of sister cells
[gene\|F981C605C652D1A4429579A5F24608CE7F570834\|skfB]	maturation of [protein\|DDB0022F50999AC52809D651C9CC5A5FDC71302C\|spore killing factor]
[gene\|4DFF9924E07D834F37580D73E88451C1671C5111\|skfC]	may be involved in spore killing
[gene\|5886364199844356446C08F08664B301A714E74A\|skfE]	export of the spore killing factor [protein\|DDB0022F50999AC52809D651C9CC5A5FDC71302C\|skfA]
[gene\|77D93CAEF46EBBB9BAF570714445E194D5F2884E\|skfF]	export of the spore killing factor [protein\|DDB0022F50999AC52809D651C9CC5A5FDC71302C\|skfA]
[gene\|527AB8EAAF0A1AAD4E5B714B35ED9F78BECC17EC\|skfG]	unknown
[gene\|F31B12F80AFC3580FD33811A1C22E74F75DC1A85\|skfH]	unknown
[gene\|E04C67FB0EA3FFEC8FB68440F4661505C3DFDA29\|ybcC]	uptake of bicarbonate
[gene\|5D96DF2F32050BBCEC3811843398FE84DE88F6DF\|ybcF]	unknown
[gene\|EBE0360D89E50EEBB84CC853C6E4B4053DBF8925\|ybcH]	unknown
[gene\|6E063903E9E3B770CAACA9DF98DFA540FAE6FD3D\|ybcI]	unknown
[gene\|C8070C5525BB0763161EDC2127757BAE6C937823\|ybcL]	unknown
[gene\|47E3AEE400EC9505C7C7DB07BF172E4FA957F708\|ybcM]	unknown
[gene\|C26EAFC9DC4A930F1887E0B99770F5F386A407D3\|ybzH]	unknown