ydgG
168
similar to transcriptional regulator ([wiki|MarR family])
locus
BSU_05640
Molecular weight
17.13 kDa
pI
5.62
function
unknown
product
unknown
essential
no
synonyms
ydgG
Outlinks
Genomic Context
Categories containing this gene/protein
List of homologs in different organisms, belongs to COG1846 (Galperin et al., 2021)
This gene is a member of the following regulons
Gene
Coordinates
608,933 609,391
The protein
Protein family
[wiki|MarR family]
[wiki|Domains]
[wiki|HTH marR-type domain] (aa 3-143) (according to UniProt)
Structure
[AF|P96705]
Expression and Regulation
Operons
genes
[gene|833F4B9ECB609D5EBAD0CAA55E1F601A5C1C3787|ydgG]-[gene|1632474628BEA113F297897D152276A1AB73BAE8|ydgH]
description
[Pubmed|16267290]
regulation
induced by DNA damage ([protein|search|LexA]) [Pubmed|16267290]
regulatory mechanism
[protein|D267AF38B0CF107042326E9B8F3DD3C9C85840E4|lexA]: repression, [Pubmed|16267290], in [regulon|protein:D267AF38B0CF107042326E9B8F3DD3C9C85840E4|lexA regulon]
Biological materials
Mutant
MGNA-C160 (ydgG::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/2158 NBRP B. subtilis, Japan]
CS209 (''[gene|833F4B9ECB609D5EBAD0CAA55E1F601A5C1C3787|ydgG]''::''aphA3'', available in [wiki|Colin Harwood]'s and [wiki|Jörg Stülke]'s labs) [Pubmed|27197833]
BKE05640 ([gene|833F4B9ECB609D5EBAD0CAA55E1F601A5C1C3787|ydgG]::erm trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKE05640 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CAATATCTTCCCCTCCTCAT, downstream forward: _UP4_TTTAAAGGAGGAGATTCTGC
BKK05640 ([gene|833F4B9ECB609D5EBAD0CAA55E1F601A5C1C3787|ydgG]::kan trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKK05640 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CAATATCTTCCCCTCCTCAT, downstream forward: _UP4_TTTAAAGGAGGAGATTCTGC
References
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Time of last update: 2025-05-13 09:11:12
Author of last update: Melvin.boenninger