pelC
168
pectate lyase C
locus
BSU_34950
Molecular weight
24.13 kDa
pI
9.14
function
degradation of polygalacturonic acid
product
pectate lyase C
essential
no
ec
4.2.2.2
synonyms
pelC, yvpA
Outlinks
Genomic Context
Categories containing this gene/protein
List of homologs in different organisms
This gene is a member of the following regulons
Gene
Coordinates
3,590,603 3,591,268
The protein
Catalyzed reaction/ biological activity
Eliminative cleavage of (1->4)-alpha-D-galacturonan to give oligosaccharides with 4-deoxy-alpha-D-galact-4-enuronosyl groups at their non-reducing ends (according to UniProt)
Protein family
polysaccharide lyase 3 family (single member, according to UniProt)
Structure
[PDB|1EE6] (from Bacillus sp., 58% identity) [pubmed|11717490]
[AF|O34310]
[wiki|Localization]
extracellular (signal peptide) [Pubmed|18957862]
Expression and Regulation
Operons
genes
[gene|950D355D993DF79AD5288A00AA04A775637AC04D|yvpB]-[gene|99ECA1B305145A63BD3A72094EF24F56D875BCC1|pelC]
description
[Pubmed|22383849]
Biological materials
Mutant
MGNA-A382 (yvpA::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/382 NBRP B. subtilis, Japan]
BKE34950 ([gene|99ECA1B305145A63BD3A72094EF24F56D875BCC1|pelC]::erm trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKE34950 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CAATGATAAATCCTCCCCGG, downstream forward: _UP4_TTTTAACAAAAAAAGTCCGC
BKK34950 ([gene|99ECA1B305145A63BD3A72094EF24F56D875BCC1|pelC]::kan trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKK34950 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CAATGATAAATCCTCCCCGG, downstream forward: _UP4_TTTTAACAAAAAAAGTCCGC
References
Page visits: 4789
Time of last update: 2025-05-02 23:34:06
Author of last update: Melvin.boenninger